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Section change error#504

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mgeplf wants to merge 75 commits intomasterBlueBrain/MorphIO:masterfrom section-change-errorBlueBrain/MorphIO:section-change-errorCopy head branch name to clipboard

+89-17

Commits

Commits on May 22, 2023

• move SWC Sample parsing out of errorMessages header

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• use braces in ifs

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  3912b6a

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Commits on May 23, 2023

• add test for German morphologies

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  eadb1fa

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• force locale

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• manual swc parser

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• see locales

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• simplify logic

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• see locales

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• add german locales to github linux installs

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• quell "error: macro is not used"

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• reduce the creation and free'ing of locals

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• handle errors better

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Commits on May 24, 2023

• added trailing space test for swc; format

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• switch to better interface

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• cleanup macro

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• try Swiss German

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• we should name locales the same

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  a3fa6f8

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• cleanup includes

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Commits on May 31, 2023

• cleanup

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Commits on Jun 20, 2023

• working

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• added error for EARLY_END_OF_FILE

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• cleanup

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• docstrings

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Commits on Jun 22, 2023

• Merge remote-tracking branch 'origin/master' into no-scanf-tokenstream

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  d05acdc

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• update test

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  a1c4dc1

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• better comment

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Commits on Jun 23, 2023

• Merge remote-tracking branch 'origin/master' into no-scanf-tokenstream

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  64428e1

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• coverage

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Commits on Jun 29, 2023

• Merge remote-tracking branch 'origin/master' into no-scanf-tokenstream

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Commits on Jul 3, 2023

• format

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• use at for map access

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• Merge remote-tracking branch 'origin/master' into no-scanf-tokenstream

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Commits on Jul 4, 2023

• Merge remote-tracking branch 'origin/master' into no-scanf-tokenstream

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• rename private members

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  5355072

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• make readSamples standalone

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  cf83223

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Commits on Jul 14, 2023

• simplify building of SWC morphologies

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  6e07e4a

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Commits on Jul 17, 2023

• simplify buildSWC

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  e3ff9fa

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Commits on Jul 18, 2023

• cleanup

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Commits on Jul 26, 2023

• * add test for test_multi_type_section

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• fix dendrites originating from non-first-soma sample

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Commits on Jul 27, 2023

• follow old version where bifurcated soma w/ 3 points was always SOMA_NEUROMORPHO_THREE_POINT_CYLINDERS

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• check for missing parents

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  cbcd3f2

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• soma-less root sections should include their own point

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• clang format

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  889f5f5

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• cleanup

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  57e4e98

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Commits on Oct 2, 2023

• properly handle windows end of line in swc parser

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Commits on Oct 10, 2023

• style

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• Merge remote-tracking branch 'origin/master' into efficient-swc-build

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  d8fcc4b

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• changelog

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  2954e66

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• fix warning test

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  a7e56ec

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Commits on Oct 11, 2023

• fix neuromorpho 3 point somas

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Commits on Oct 16, 2023

• fix test_root_node_split

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  19f5e2d

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• should apt-get update first

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  0457d8b

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Commits on Oct 17, 2023

• fix missing data

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Commits on Jan 9, 2024

• Merge remote-tracking branch 'origin/master' into efficient-swc-build

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Commits on Jan 12, 2024

• asdf

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  37c008c

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• fix 3 point soma handling

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• Only H5/asc files require root points w/ two or more.

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• raise exception for writing empty morphology

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Commits on Feb 13, 2024

• add support for extra columns that are ignored

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Commits on May 14, 2024

• Merge remote-tracking branch 'origin/master' into efficient-swc-build

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  a44b254

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• add support for extra columns that are ignored

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  e84d8b5

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• fix

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  9b94928

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Commits on May 15, 2024

• format

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• asdf

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  216090e

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• add locale-de to coverage build

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  0a31446

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• fix test

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  ea58535

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• remove test_root_node_split

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Commits on Sep 10, 2024

• fix typo

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Commits on Sep 11, 2024

• Create a warning if the section type changes without a bifurcation

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Commits on Oct 4, 2024

• Add option to allow for sections changes in SWC files without bifurcation

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• Merge remote-tracking branch 'origin/master' into section-change-error

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• debug

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• Merge remote-tracking branch 'origin/master' into section-change-error

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Commits on Oct 11, 2024

• Merge remote-tracking branch 'origin/master' into section-change-error

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