0.3.0

Alert: major revision

FuseMedML new version introduces a few minor backward compatibility breaks.
Including new installation instructions.

What's Changed

• Add vit isic by @smartdanny in #221
• remove protobuf from dependencies by @alex-golts in #225
• Added more descriptive error messages and hints for common usage mistakes by @YoelShoshan in #226
• support arbitrary (not sequential and even not ints) balanced class values by @mosheraboh in #227
• update DL readme according to JOSS reviewer comments by @alex-golts in #232
• Some changes from DTI task (Add doc' and some small features) by @SagiPolaczek in #233
• knight data download script by @alex-golts in #235
• raise an exception in case of str input/outputs by @smartdanny in #234
• Auc metric fix by @avihu111 in #237
• CICD fix by @mosheraboh in #239
• fix learning rate and added config options by @liamhazan in #238
• Ensemble of multi-modal survival models by @michalozeryflato in #231
• add downsample option to BatchSamplerDefault by @mosheraboh in #246
• Ehr transformer ICU example by @ellabarkan in #245
• Simple MNIST Example by @smartdanny in #240
• Ehr transformer example by @ellabarkan in #256
• a more configureable resnet3d implementation by @avihu111 in #257
• not strict mode in ProjectPatchesTokenizer by @avihu111 in #260
• allow non-int sample ids in DatasetDefault by @alex-golts in #259
• support not specifying number of channels in ModelMultiHead by @alex-golts in #244
• update JOSS paper citation and badge by @alex-golts in #263
• support shallow copy of pipelines by @michalozeryflato in #262
• fix bug with specific binary input format by @alex-golts in #264
• Ndict support hydra by @michalozeryflato in #265
• add props to dataset and pipelines + small fix to cacher by @michalozeryflato in #266
• optimized train time for a use case of small samples and large batch by @mosheraboh in #268
• add multi-label metric cladd and func by @egozi in #269
• torchvision version upper bound fix by @SagiPolaczek in #254
• Additional model - CrossAttentionTransformerEncoder by @SagiPolaczek in #251
• ddp_fix by @smartdanny in #270
• NDict optimization by @SagiPolaczek in #271
• remove examples. prefix by @alex-golts in #276
• make examples subpackage (fuse_examples) by @mosheraboh in #277
• Fixes for the Hello World notebook by @SagiPolaczek in #275
• Pl model save + export the entire dataset (all keys) to dataframe by @mosheraboh in #281

New Contributors

• @ellabarkan made their first contribution in #245

Full Changelog: 0.2.9...0.3.0