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Make quarto pass with more specific substitution
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almahmoud authored May 4, 2024
1 parent 378b697 commit ff0af6a
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2 changes: 1 addition & 1 deletion .github/scripts/rocker_prep.sh
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ ARCH=$4
git clone --depth 1 https://github.com/rocker-org/rocker-versioned2
sed -i "s#rocker/r-ver:$RVER#$ROCKERPREF-r-ver:$RVER-$ARCH#g" rocker-versioned2/dockerfiles/rstudio_$RVER.Dockerfile
sed -i "s#rocker/rstudio:$RVER#$ROCKERPREF-rstudio:$RVER-$ARCH#g" rocker-versioned2/dockerfiles/tidyverse_$RVER.Dockerfile
sed -i "s#install_quarto.sh#install_quarto.sh || true#g" rocker-versioned2/dockerfiles/rstudio_$RVER.Dockerfile
sed -i "s#RUN /rocker_scripts/install_quarto.sh#RUN /rocker_scripts/install_quarto.sh || true#g" rocker-versioned2/dockerfiles/rstudio_$RVER.Dockerfile

echo "Bioconductor Version: $BIOCVER"
if [ "$RVER" == "devel" ]; then
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