Update test_gapfiller.py

BioSystemsUM · Nov 24, 2023 · 81874df · 81874df
1 parent 001d861
commit 81874df
Showing 1 changed file with 6 additions and 6 deletions.
diff --git a/tests/unit_tests/biomeneco/test_gapfiller.py b/tests/unit_tests/biomeneco/test_gapfiller.py
@@ -42,15 +42,15 @@ def __init__(self, id, *args, **kwargs):
 class TestGapFiller(unittest.TestCase):
 
     def setUp(self):
-        # Setup for the tests, creating a GapFiller instance
-        self.model_path = "/Users/josediogomoura/gap_filling_dl/tests/data/test_model/model_toy_network_copy.xml"
-        self.universal_model_path = '/Users/josediogomoura/gap_filling_dl/utilities/universal_model.xml'
-        self.results_path = os.path.join(TEST_DIR, "data/test_model/output")
+        base_dir = os.path.dirname(os.path.dirname(os.path.dirname(__file__)))
+        self.model_path = os.path.join(base_dir, "data/test_model/model_toy_network_copy.xml")
+        self.universal_model_path = os.path.join(base_dir, "utilities/universal_model.xml")
+        self.results_path = os.path.join(base_dir, "data/test_model/output")
         self.max_solutions = 1
         self.gf = GapFiller(self.model_path, self.universal_model_path, self.results_path, self.max_solutions)
 
-        self.gf.seeds_path = os.path.join(TEST_DIR, "data/test_model/model_seeds.xml")
-        self.gf.targets_path = os.path.join(TEST_DIR, "data/test_model/model_targets.xml")
+        self.gf.seeds_path = os.path.join(base_dir, "data/test_model/model_seeds.xml")
+        self.gf.targets_path = os.path.join(base_dir, "data/test_model/model_targets.xml")
 
     # def tearDown(self):
     #     # remove the mock files