Tests and doc build

BioJulia · Dec 23, 2024 · e1a0265 · e1a0265
1 parent b4afb8f
commit e1a0265
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Showing 2 changed files with 8 additions and 11 deletions.
diff --git a/.github/workflows/Documentation.yml b/.github/workflows/Documentation.yml
@@ -10,16 +10,13 @@ on:
   pull_request:
 
 jobs:
-  build:
+  Documenter:
+    name: Documentation
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v2
-      - uses: julia-actions/setup-julia@v1
-        with:
-          version: '1'
-      - name: Install dependencies
-        run: julia --color=yes --project=docs/ -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd())); Pkg.instantiate()'
-      - name: Build and deploy
+      - uses: julia-actions/julia-buildpkg@latest
+      - uses: julia-actions/julia-docdeploy@latest
         env:
-          DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }} # For authentication with SSH deploy key
-        run: julia --color=yes --project=docs/ docs/make.jl
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+          DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }}
diff --git a/test/runtests.jl b/test/runtests.jl
@@ -741,8 +741,8 @@ end
         ]
         @test v == v2
 
-        s = dna"TAGCTAGGATCwAGCTkTAGGCsKTAGC"
-        it = UnambiguousKmers{DNAAlphabet{2}, 7, LongDNA{4}}(s)
+        s = LongSequence{GenericNucAlphabet}(dna"TGATCGTAGATGATGTC")
+        it = UnambiguousKmers{DNAAlphabet{2}, 7, LongSequence{GenericNucAlphabet}}(s)
         it2 = UnambiguousDNAMers{7}(s)
         @test collect(it) == collect(it2)
     end