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PHES-ODM Sharing Library

The purpose of this library is to support wastewater-based surveillance and epidemiology by facilitating the collection, standardization, and transparency of data by providing a more harmonized ODM data format to share data between different data curators and data repositories.

Features

  • A standard schema format defining rules for data filtering:
    • specify custom rules per organization
    • specify tables and columns to include
    • specify filters for which rows to include
  • A Python library for performing each step of the process
  • A CLI for easy one-shot sharing

Usage

See docs/manual/getting-started.qmd.

Install

See docs/manual/install.qmd.