Fix bug

BMCV · Mar 12, 2024 · 3f7fc07 · 3f7fc07
1 parent fa4501f
commit 3f7fc07
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Showing 3 changed files with 5 additions and 3 deletions.
diff --git a/tools/2d_auto_threshold/auto_threshold.py b/tools/2d_auto_threshold/auto_threshold.py
@@ -43,7 +43,7 @@ def do_thresholding(in_fn, out_fn, th_method, block_size=5, threshold=0, invert_
     parser.add_argument('th_method', choices=th_methods.keys(), help='Thresholding method')
     parser.add_argument('block_size', type=int, default=5, help='Odd size of pixel neighborhood for calculating the threshold')
     parser.add_argument('threshold', type=float, default=0, help='Manual thresholding value')
-    parser.add_argument('invert_output', default=False, type=bool, help='Values below/above the threshold are labeled with 0/255 if False, and with 255/0 otherwise')
+    parser.add_argument('--invert_output', default=False, action='store_true', help='Values below/above the threshold are labeled with 0/255 by default, and with 255/0 if this argument is used')
     args = parser.parse_args()
 
     do_thresholding(args.im_in, args.im_out, args.th_method, args.block_size, args.threshold, args.invert_output)
diff --git a/tools/2d_auto_threshold/auto_threshold.xml b/tools/2d_auto_threshold/auto_threshold.xml
@@ -2,7 +2,7 @@
     <description>with scikit-image</description>
     <macros>
         <token name="@TOOL_VERSION@">0.18.1</token>
-        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@VERSION_SUFFIX@">1</token>
     </macros>
     <edam_operations>
         <edam_operation>operation_3443</edam_operation>
@@ -23,7 +23,9 @@
     '$th_method.method_id'
     '$th_method.block_size'
     '$th_method.threshold'
-    '$invert_output'
+    #if $invert_output:
+        --invert_output
+    #end if
     ]]>
     </command>
     <inputs>

diff --git a/tools/2d_auto_threshold/test-data/out3.tif b/tools/2d_auto_threshold/test-data/out3.tif