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Merge branch 'master' into update-ci
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kostrykin authored Aug 12, 2024
2 parents 5de2925 + 649a1e6 commit 2b74606
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1 change: 1 addition & 0 deletions README.md
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Expand Up @@ -23,6 +23,7 @@ If Galaxy Image Analysis helped with the analysis of your data, please do not fo
- [Perform histogram equalization](https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/imgteam/2d_histogram_equalization/ip_histogram_equalization) with scikit-image
- [Permutate image axes](https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/imgteam/permutate_axis/ip_permutate_axis)
- [Process images using arithmetic expressions](https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/imgteam/image_math/image_math) with NumPy
- [Remove image background](https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/imgteam/background_removal/background_removal/0.24.0+galaxy0) with scikit-image
- [Scale image](https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/imgteam/scale_image/ip_scale_image) with scikit-image
- [Show image info](https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/imgteam/image_info/ip_imageinfo) with Bioformats
- [Slice image into patches](https://usegalaxy.eu/root?tool_id=toolshed.g2.bx.psu.edu/repos/imgteam/slice_image/ip_slice_image)
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6 changes: 3 additions & 3 deletions tools/background_removal/background_removal.xml
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Expand Up @@ -4,7 +4,7 @@
<import>creators.xml</import>
<import>tests.xml</import>
<token name="@TOOL_VERSION@">0.24.0</token>
<token name="@VERSION_SUFFIX@">0</token>
<token name="@VERSION_SUFFIX@">1</token>
</macros>
<creator>
<expand macro="creators/rmassei"/>
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</command>
<inputs>
<param name="input_image" type="data" format="tiff, jpg, jpeg, png, tif" label="Input Image"/>
<param name="filter" type="select" label="Select Filter">
<param name="filter" type="select" label="Method">
<option value="rolling_ball">Rolling-ball algorithm</option>
<option value="dog">Difference of Gaussians</option>
<option value="top_hat">Top-hat filter</option>
</param>
<param name="radius" type="float" label="Radius" value="20"/>
<param name="radius" type="float" label="Radius" value="20" help="The radius of the local neighborhood (in pixels)."/>
</inputs>
<outputs>
<data name="output" format="tiff" label="Background substraction output"/>
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