work webpage

BIG-MAP · Jan 26, 2024 · 56739d1 · 56739d1
1 parent 9c0221b
commit 56739d1
Show file tree

Hide file tree

Showing 6 changed files with 64 additions and 173 deletions.
diff --git a/.github/utils/publish_ontologies.py b/.github/utils/publish_ontologies.py
diff --git a/.github/workflows/ci_tests.yml b/.github/workflows/ci_tests.yml
@@ -30,50 +30,4 @@ jobs:
           --configfile=.github/utils/emmocheck_config.yml \
           battinfo.ttl
 
-  documentation-build:
-    name: Documentation
-    runs-on: ubuntu-latest
-    env:
-      ONTODOC_DIR: doc/ontodoc
-      TMP_DIR: tmp
-      PAGES_DIR: gh-pages
-      PUBLISH_ONTOLOGIES_DIR: ontology
-
-    steps:
-    - name: Checkout repository
-      uses: actions/checkout@v3
-
-    - name: Setup Python 3.7
-      uses: actions/setup-python@v4
-      with:
-        python-version: 3.7
-
-    - name: Install pandoc 2.1.2
-      run: |
-        sudo apt-get update
-        #sudo apt-get install pandoc  # we need v2.1.2
-        wget https://github.com/jgm/pandoc/releases/download/2.1.2/pandoc-2.1.2-1-amd64.deb
-        sudo apt-get install -y ./pandoc-2.1.2-1-amd64.deb
-
-    - name: Install other dependencies
-      run: |
-        sudo apt-get update
-        sudo apt-get install -y graphviz texlive-xetex texlive-latex-extra
-
-    - name: Install Python dependencies
-      run: |
-        python -m pip install --upgrade pip
-        pip install -U setuptools wheel
-        pip install -r requirements.txt
-
-    - name: Setup git identity
-      run: |
-        cd ${GITHUB_WORKSPACE}
-        git config --global user.email "${GIT_USER_EMAIL}"
-        git config --global user.name "${GIT_USER_NAME}"
-
-    - name: Publish ontologies
-      run: python ${GITHUB_WORKSPACE}/.github/utils/publish_ontologies.py
 
-    - name: Update GitHub Pages
-      run: ${GITHUB_WORKSPACE}/${ONTODOC_DIR}/update-pages.sh TEST
diff --git a/sphinx/_static/css/custom.css b/sphinx/_static/css/custom.css
@@ -0,0 +1,34 @@
+td.element-table-key, td.element-table-value {
+    vertical-align: top;
+}
+
+td.element-table-key {
+    text-align: right;
+    padding-right: 2mm;
+    width: 20%;
+}
+
+span.element-table-key {
+    font-weight: bold;
+}
+
+table.element-table {
+    width: 100%;
+    text-align: left;
+}
+
+html table.element-table tr:nth-child(odd) td{
+   background-color: Gainsboro;
+}
+
+table.element-table tr:nth-child(even) td{
+   background-color: GhostWhite;
+}
+
+html[data-theme=dark] table.element-table tr:nth-child(odd) td{
+   background-color: black;
+}
+
+html[data-theme=dark] table.element-table tr:nth-child(even) td{
+   background-color: black;
+}
diff --git a/sphinx/resources.rst b/sphinx/resources.rst
@@ -0,0 +1,19 @@
+Resources
+=========
+
+Best Practices
+--------------
+- `Data on the Web Best Practices <https://www.w3.org/TR/dwbp/>`_
+- `Best Practices for Publishing Linked Data <https://www.w3.org/TR/ld-bp/>`_
+
+Tabular Data
+------------
+- `Model for Tabular Data and Metadata on the Web <https://www.w3.org/TR/2015/REC-tabular-data-model-20151217/>`_
+- `Metadata Vocabulary for Tabular Data <https://www.w3.org/TR/2015/REC-tabular-metadata-20151217/>`_
+
+RDF Vocabularies
+----------------
+- `RDF Schema <https://www.w3.org/TR/rdf-schema/>`_
+- `Simple Knowledge Organization System (SKOS) <https://www.w3.org/2004/02/skos/>`_
+- `Dublin Core <https://www.dublincore.org/specifications/dublin-core/dcmi-terms/>`_
+- `Schema.org <https://schema.org/>`_
diff --git a/sphinx/ttl_to_rst.py b/sphinx/ttl_to_rst.py
@@ -23,12 +23,13 @@ def extract_terms_info_sparql(g: Graph)-> list:
     PREFIXES = """
         PREFIX emmo: <http://emmo.info/emmo#>
         PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
+        PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
         """
 
-    list_entity_types = ["IRI", "prefLabel", "Elucidation", "Alternative Label(s)", "IEC Reference", "IUPAC Reference", "Wikipedia Reference"]
+    list_entity_types = ["IRI", "prefLabel", "Elucidation", "Alternative Label(s)", "IEC Reference", "IUPAC Reference", "Wikipedia Reference", "Wikidata Reference", "Comment", ]
 
     query =  PREFIXES  + """
-        SELECT ?iri ?prefLabel ?elucidation (GROUP_CONCAT(?altLabel; SEPARATOR=", ") AS ?altLabels) ?iecref ?iupacref ?wikipediaref
+        SELECT ?iri ?prefLabel ?elucidation (GROUP_CONCAT(?altLabel; SEPARATOR=", ") AS ?altLabels) ?iecref ?iupacref ?wikipediaref ?wikidataref ?comment
         WHERE {
             ?iri skos:prefLabel ?prefLabel.
 
@@ -37,6 +38,8 @@ def extract_terms_info_sparql(g: Graph)-> list:
             OPTIONAL { ?iri emmo:EMMO_50c298c2_55a2_4068_b3ac_4e948c33181f ?iecref . }
             OPTIONAL { ?iri emmo:EMMO_fe015383_afb3_44a6_ae86_043628697aa2 ?iupacref . }
             OPTIONAL { ?iri emmo:EMMO_c84c6752_6d64_48cc_9500_e54a3c34898d ?wikipediaref . }
+            OPTIONAL { ?iri emmo:EMMO_26bf1bef_d192_4da6_b0eb_d2209698fb54 ?wikidataref . }
+            OPTIONAL { ?iri rdfs:comment ?comment . }
         }
 
         GROUP BY ?iri ?prefLabel ?elucidation
@@ -62,9 +65,9 @@ def extract_terms_info_sparql(g: Graph)-> list:
 def render_rst_top() -> str:
 
     top_rst = """
-==========
-References
-==========
+===========
+Class Index
+===========
 
 """
 
@@ -132,10 +135,8 @@ def rendering_workflow():
 
     # PAGES
     ttl_modules = [
-        {"section title": "Battery Concepts",
-         "path": "./battery.ttl"},
-        {"section title": "Battery Quantities",
-         "path": "./batteryquantities.ttl"}
+        {"section title": "BattINFO",
+         "path": "./battery.ttl"}
     ]
 
     # GENERATE PAGES

diff --git a/sphinx/util.el b/sphinx/util.el
@@ -21,7 +21,7 @@
   (let ((outputbuffer (get-buffer-create "*buildoutput*")))
     (pop-to-buffer outputbuffer)
     (cd docdir)
-    (pyvenv-activate "~/Python/battinfo-doc-3.7-env/")
+    (pyvenv-activate "~/Python/battinfodoc.env/")
     (erase-buffer)
     (start-process "battinfo-build" outputbuffer "make" "html")
     )