Skip to content

Commit

Permalink
Updated server-side configuration changes (#43)
Browse files Browse the repository at this point in the history
* Server-side configuration changes

* Updated docker config

* Cleanup

* Fixes

* AWS testing fixes

* Updated SHR version

* Test fix
  • Loading branch information
pmanko authored Aug 31, 2022
1 parent cf8cd98 commit 5c2d0df
Show file tree
Hide file tree
Showing 8 changed files with 60 additions and 49 deletions.
4 changes: 2 additions & 2 deletions .env
Original file line number Diff line number Diff line change
@@ -1,3 +1,3 @@
SHR_VERSION=v0.7.0
FHIR_CONVERTER_VERSION=v3.1.4
SHR_VERSION=v0.7.1
FHIR_CONVERTER_VERSION=v3.2.1
OMANG_SVC_VERSION=v1.6.3
10 changes: 5 additions & 5 deletions .postman/collections/3_lab_workflows.postman_collection.json
Original file line number Diff line number Diff line change
Expand Up @@ -359,15 +359,15 @@
}
},
"url": {
"raw": "{{openhim-url}}/72f/convert/fhir/ADT_in.hbs",
"raw": "{{openhim-url}}/72f/convert/fhir/ADT_A04_TO_IPMS.hbs",
"host": [
"{{openhim-url}}"
],
"path": [
"72f",
"convert",
"fhir",
"ADT_in.hbs"
"ADT_A04_TO_IPMS.hbs"
]
}
},
Expand Down Expand Up @@ -422,7 +422,7 @@
]
},
{
"name": "04 SHR --> IPMS: ORM",
"name": "06 SHR --> IPMS: ORM",
"item": [
{
"name": "Send Lab Order To IPMS (ORM)",
Expand Down Expand Up @@ -459,15 +459,15 @@
}
},
"url": {
"raw": "{{openhim-url}}/72f/convert/fhir/OBR.hbs",
"raw": "{{openhim-url}}/72f/convert/fhir/ORM_O01_TO_IPMS.hbs",
"host": [
"{{openhim-url}}"
],
"path": [
"72f",
"convert",
"fhir",
"OBR.hbs"
"ORM_O01_TO_IPMS.hbs"
]
}
},
Expand Down
2 changes: 1 addition & 1 deletion configs/opencr/config.json
Original file line number Diff line number Diff line change
Expand Up @@ -69,7 +69,7 @@
}
},
"sync": {
"lastFHIR2ESSync": "2022-07-08T03:45:49"
"lastFHIR2ESSync": "2022-08-31T19:24:26"
},
"__comments": {
"matching.tool": "this tells if the app should use mediator algorithms or elasticsearch algorithms for matching, two options mediator and elasticsearch"
Expand Down
4 changes: 2 additions & 2 deletions configs/openhim-console/default.json
Original file line number Diff line number Diff line change
Expand Up @@ -2,8 +2,8 @@
"version": "1.13.2",
"minimumCoreVersion": "5.2.0",
"protocol": "https",
"host": "10.171.5.12",
"hostPath": "/openhim-api",
"host": "core.moh.org.bw",
"hostPath": "",
"port": "",
"title": "Botswana HIE Admin Console",
"footerTitle": "OpenHIM Administration Console",
Expand Down
27 changes: 20 additions & 7 deletions configs/shr/config.json
Original file line number Diff line number Diff line change
Expand Up @@ -3,10 +3,6 @@
"port": 3000,
"mllpPort": 3001
},
"mllp": {
"targetIp": "shr",
"targetPort": 3001
},
"mediator": {
"api": {
"username": "[email protected]",
Expand All @@ -21,11 +17,28 @@
}
},
"fhirServer": {
"mpiURL": "https://openhim-core:5000/CR/fhir",
"baseURL": "http://shr-fhir:8080/fhir"
},
"fhirConverterUrl": "https://openhim-core:5000/72f",
"clientRegistryUrl": "http://openhim-core:5001/CR/fhir",
"fhirConverterUrl": "http://openhim-core:5001/72f",
"taskRunner": {
"brokers" : ["kafka:9092"]
"brokers": [
"kafka:9092"
]
},
"bwConfig": {
"pimsSystemUrl": "https://api.openconceptlab.org/orgs/B-TECHBW/sources/PIMS-LAB-TEST-DICT/",
"omangSystemUrl": "http://moh.bw.org/ext/identifier/omang",
"oclUrl": "https://api.openconceptlab.org",
"requestTimeout": 10000,
"toIpmsAdtTemplate": "ADT_A04_TO_IPMS.hbs",
"fromIpmsAdtTemplate": "ADT_A04_FROM_IPMS.hbs",
"toIpmsOrmTemplate": "ORM_O01_TO_IPMS.hbs",
"fromIpmsOruTemplate": "ORU_R01_FROM_IPMS.hbs",
"mllp": {
"targetIp": "localhost",
"targetAdtPort": 2100,
"targetOrmPort": 2100
}
}
}
2 changes: 1 addition & 1 deletion configs/traefik/certs.yml
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
tls:
certificates:
- certFile: /etc/certs/live/moh.org.bw/cert.pem
- certFile: /etc/certs/live/moh.org.bw/fullchain.pem
keyFile: /etc/certs/live/moh.org.bw/privkey.pem
3 changes: 2 additions & 1 deletion configs/traefik/traefik.yml
Original file line number Diff line number Diff line change
Expand Up @@ -13,7 +13,8 @@ entryPoints:
web-secure:
address: :443
api:
insecure: true
dashboard: true
insecure: false
providers:
file:
watch: true
Expand Down
57 changes: 27 additions & 30 deletions docker-compose.yml
Original file line number Diff line number Diff line change
Expand Up @@ -17,9 +17,11 @@ services:
# reverse proxy
###
traefik:
image: traefik:v2.6.1
image: traefik:v2.8.3
container_name: traefik
restart: unless-stopped
ports:
- '80:80'
- '443:443'
- '8080:8080'
volumes:
Expand All @@ -29,10 +31,15 @@ services:
- certs:/etc/certs
networks:
- hie
environment:
- AWS_ACCESS_KEY_ID
- AWS_SECRET_ACCESS_KEY
- AWS_HOSTED_ZONE_ID
labels:
- 'traefik.enable=true'
- 'traefik.docker.network=hie-botswana_hie'
- "traefik.http.routers.api.rule=Host(`traefik.moh.org.bw`)"
- "traefik.http.routers.api.service=api@internal"
- 'traefik.http.routers.api.tls=true'
- 'traefik.http.routers.api.entrypoints=web-secure'
# - "traefik.http.routers.api.middlewares=auth"
# - "traefik.http.middlewares.auth.basicauth.users=test:$$apr1$$H6uskkkW$$IgXLP6ewTrSuBkTrqE8wj/,test2:$$apr1$$d9hr9HBB$$4HxwgUir3HP4EsggP/QNo0"

## TODO: Set up Traefik for AWS DNS properly and remove
certbot:
Expand Down Expand Up @@ -70,10 +77,7 @@ services:
- 'traefik.http.routers.opencr.tls=true'
- 'traefik.http.routers.opencr.entrypoints=web-secure'
- 'traefik.http.services.opencr.loadbalancer.server.port=3000'
- 'traefik.http.routers.opencr.rule=PathPrefix(`/opencr`)'
- 'traefik.http.routers.opencr.middlewares=opencr'
- 'traefik.http.middlewares.opencr.stripprefix.prefixes=/opencr'
- 'traefik.http.middlewares.opencr.stripprefix.forceSlash=false'
- 'traefik.http.routers.opencr.rule=Host(`opencr.moh.org.bw`)'
opencr-fhir:
image: hapiproject/hapi:latest
container_name: opencr-fhir
Expand Down Expand Up @@ -128,7 +132,8 @@ services:
- ./configs/shr/config.json:/app/config/config_docker.json
- ./configs/shr/mediator.json:/app/config/mediator_docker.json
ports:
- 80:3001
- 3001:3001
- 3002:3002
shr-fhir:
image: hapiproject/hapi:latest
container_name: shr-fhir
Expand Down Expand Up @@ -175,20 +180,17 @@ services:
- 'traefik.http.routers.openhim-api.service=openhim-api'
- 'traefik.http.routers.openhim-api.tls=true'
- 'traefik.http.routers.openhim-api.entrypoints=web-secure'
- 'traefik.http.routers.openhim-api.rule=PathPrefix(`/openhim-api`)'
- 'traefik.http.routers.openhim-api.middlewares=openhim-api'
- 'traefik.http.middlewares.openhim-api.stripprefix.prefixes=/openhim-api'
- 'traefik.http.middlewares.openhim-api.stripprefix.forceSlash=false'
- 'traefik.http.routers.openhim-api.rule=Host(`core.moh.org.bw`)'

- 'traefik.http.services.openhim-core.loadbalancer.server.port=5000'
- 'traefik.http.services.openhim-core.loadbalancer.server.scheme=https'
- 'traefik.http.routers.openhim-core.service=openhim-core'
- 'traefik.http.routers.openhim-core.tls=true'
- 'traefik.http.routers.openhim-core.entrypoints=web-secure'
- 'traefik.http.routers.openhim-core.rule=PathPrefix(`/openhim-core`)'
- 'traefik.http.routers.openhim-core.middlewares=openhim-core'
- 'traefik.http.middlewares.openhim-core.stripprefix.prefixes=/openhim-core'
- 'traefik.http.middlewares.openhim-core.stripprefix.forceSlash=false'
- 'traefik.http.routers.openhim-core.rule=Host(`openhim.moh.org.bw`)'
ports:
- 5001:5001
- 8091:8080

openhim-console:
container_name: openhim-console
Expand All @@ -207,10 +209,7 @@ services:
- 'traefik.docker.network=hie-botswana_hie'
- 'traefik.http.routers.openhim-console.tls=true'
- 'traefik.http.routers.openhim-console.entrypoints=web-secure'
- 'traefik.http.routers.openhim-console.rule=PathPrefix(`/openhim`)'
- 'traefik.http.routers.openhim-console.middlewares=openhim-console'
- 'traefik.http.middlewares.openhim-console.stripprefix.prefixes=/openhim'
- 'traefik.http.middlewares.openhim-console.stripprefix.forceSlash=false'
- 'traefik.http.routers.openhim-console.rule=Host(`moh.org.bw`)'
networks:
- hie

Expand Down Expand Up @@ -247,14 +246,13 @@ services:
- 'traefik.docker.network=hie-botswana_hie'
- 'traefik.http.routers.converter.tls=true'
- 'traefik.http.routers.converter.entrypoints=web-secure'
- 'traefik.http.routers.converter.rule=PathPrefix(`/converter`)'
- 'traefik.http.routers.converter.middlewares=converter'
- 'traefik.http.middlewares.converter.stripprefix.prefixes=/converter'
- 'traefik.http.middlewares.converter.stripprefix.forceSlash=false'
- 'traefik.http.routers.converter.rule=Host(`converter.moh.org.bw`)'

# Kafka
zookeeper:
image: "bitnami/zookeeper:latest"
container_name: zookeeper
restart: unless-stopped
hostname: zookeeper
environment:
- ALLOW_ANONYMOUS_LOGIN=yes
Expand All @@ -266,6 +264,7 @@ services:
image: "bitnami/kafka:latest"
hostname: kafka
container_name: kafka
restart: unless-stopped
environment:
- KAFKA_BROKER_ID=1
- KAFKA_CFG_LISTENERS=PLAINTEXT://:9092
Expand Down Expand Up @@ -295,16 +294,14 @@ services:
- 'traefik.docker.network=hie-botswana_hie'
- 'traefik.http.routers.omang.tls=true'
- 'traefik.http.routers.omang.entrypoints=web-secure'
- 'traefik.http.routers.omang.rule=PathPrefix(`/omang`)'
- 'traefik.http.routers.omang.middlewares=omang'
- 'traefik.http.middlewares.omang.stripprefix.prefixes=/omang'
- 'traefik.http.middlewares.omang.stripprefix.forceSlash=false'
- 'traefik.http.routers.omang.rule=Host(`omang.moh.org.bw`)'
environment:
- TZ=GMT

oracle-db:
hostname: oracle-db
container_name: oracle-db
restart: unless-stopped
image: wnameless/oracle-xe-11g-r2:latest
environment:
- ORACLE_ALLOW_REMOTE=true
Expand Down

0 comments on commit 5c2d0df

Please sign in to comment.