feat: get project data from docdb

src/aind_qc_portal/docdb/database.py

@@ -129,6 +129,22 @@ def get_all():
     return response
 
 
+@pn.cache(ttl=TIMEOUT_1H)
+def get_project(project: str):
+    filter = {
+        "name": {"$regex": project}
+    }
+    limit = 10
+    paginate_batch_size = 100
+    response = client.retrieve_docdb_records(
+        filter_query=filter,
+        limit=limit,
+        paginate_batch_size=paginate_batch_size,
+    )
+
+    return response
+
+
 @pn.cache
 def get_subjects():
     filter = {

src/aind_qc_portal/project_app.py

@@ -0,0 +1,34 @@
+"""Project-specific views, uses configurations from projects/"""
+import panel as pn
+import param
+
+from aind_qc_portal.docdb.database import get_project
+
+
+class ProjectView(param.Parameterized):
+    project = param.String(default="smartspim")
+
+    def __init__(self, **params):
+        super().__init__(**params)
+
+    def update(self):
+        self.data = get_project(self.project)
+
+    def panel(self):
+        return pn.widgets.StaticText(value="meow")
+
+project_view = ProjectView()
+
+# Sync state with the URL
+pn.state.location.sync(
+    project_view,
+    {
+        "project": "project",
+    },
+)
+
+project_view.update()
+
+print(project_view.data[0])
+
+project_view.panel().servable()

src/aind_qc_portal/projects/mappings.py

@@ -65,7 +65,9 @@ class Mapping(BaseModel):
     ),
 }
 
-
+# asset ID, mouse ID, genotype, session type, acquisition date, processing date, pipeline version
 behavior = {
 
-}
+}
+
+# {'_id': '901c7e0e-2a7d-4600-aaa2-b4d40330d132', 'acquisition': None, 'created': '2024-05-07T16:39:45Z', 'data_description': None, 'describedBy': 'https://raw.githubusercontent.com/AllenNeuralDynamics/aind-data-schema/main/src/aind_data_schema/core/metadata.py', 'external_links': [{'Code Ocean': '28552d8f-fc1b-4f3f-9a9e-7f89b6a78ae4'}], 'instrument': None, 'last_modified': '2024-06-13T22:28:57.365951', 'location': 's3://codeocean-s3datasetsbucket-eg0euwi4ez6z/28552d8f-fc1b-4f3f-9a9e-7f89b6a78ae4', 'metadata_status': 'Unknown', 'name': 'behavior_655019_2020-10-10_01-00-24_processed_2024-05-07_16-39-45', 'procedures': None, 'processing': None, 'rig': None, 'schema_version': '0.2.7', 'session': None, 'subject': None}