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fix: fix bug preventing demo RRD files from running #26

fix: fix bug preventing demo RRD files from running

fix: fix bug preventing demo RRD files from running #26

name: Tag and publish main
on:
push:
branches:
- main
# Remove line 65 to enable automated semantic version bumps.
# Change line 71 from "if: false" to "if: true" to enable PyPI publishing.
# Requires that svc-aindscicomp be added as an admin to repo.
jobs:
update_badges:
runs-on: ubuntu-latest
continue-on-error: true
steps:
- uses: actions/checkout@v3
with:
ref: ${{ env.DEFAULT_BRANCH }}
fetch-depth: 0
token: ${{ secrets.SERVICE_TOKEN }}
- name: Set up Python 3.10
uses: actions/setup-python@v3
with:
python-version: '3.10'
- name: Install dependencies
run: |
python -m pip install -e .[dev] --no-cache-dir
- name: Get Python version and Update README.md
run: |
python_version=$(grep "requires-python" pyproject.toml | grep -o ">=[^\"]*")
python_badge=$(grep -o 'python-[^)]*' README.md)
new_python_badge="python-$python_version-blue?logo=python"
sed -i "s/$python_badge/$new_python_badge/g" README.md
- name: Get interrogate values and Update README.md
run: |
interrogate_val=$(interrogate . | grep -o 'actual: [0-9]*\.[0-9]*' | awk '{print $2}')
interrogate_badge=$(grep -o 'interrogate-[^)]*' README.md)
if (( $(echo "$interrogate_val >= 90.00" | bc -l) )); then
new_interrogate_badge="interrogate-$interrogate_val%25-brightgreen"
elif (( $(echo "$interrogate_val < 80.00" | bc -l) )); then
new_interrogate_badge="interrogate-$interrogate_val%25-red"
else
new_interrogate_badge="interrogate-$interrogate_val%25-yellow"
fi
sed -i "s/$interrogate_badge/$new_interrogate_badge/g" README.md
- name: Get Coverage values and Update README.md
run: |
coverage run -m unittest discover
coverage_val=$(coverage report | grep "^TOTAL" | grep -o '[0-9]\+%' | grep -o '[0-9]\+')
coverage_badge=$(grep -o "coverage-[^?]*" README.md)
if (( $(echo "$coverage_val >= 90.00" | bc -l) )); then
new_coverage_badge="coverage-$coverage_val%25-brightgreen"
elif (( $(echo "$coverage_val < 80.00" | bc -l) )); then
new_coverage_badge="coverage-$coverage_val%25-red"
else
new_coverage_badge="coverage-$coverage_val%25-yellow"
fi
sed -i "s/$coverage_badge/$new_coverage_badge/g" README.md
- name: Commit changes
uses: EndBug/add-and-commit@v9
with:
default_author: github_actions
message: "ci: update badges [skip actions]"
add: '["README.md"]'
tag:
needs: update_badges
if: ${{github.event.repository.name == 'aind-library-template'}}
uses: AllenNeuralDynamics/aind-github-actions/.github/workflows/tag.yml@main
secrets:
SERVICE_TOKEN: ${{ secrets.SERVICE_TOKEN }}
publish_pypi:
needs: tag
if: false
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Pull latest changes
run: git pull origin main
- name: Set up Python 3.10
uses: actions/setup-python@v2
with:
python-version: '3.10'
- name: Install dependencies
run: |
pip install --upgrade setuptools wheel twine build
python -m build
twine check dist/*
- name: Publish on PyPI
uses: pypa/gh-action-pypi-publish@release/v1
with:
password: ${{ secrets.AIND_PYPI_TOKEN }}
publish_image:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Set up Docker Buildx
id: buildx
uses: docker/setup-buildx-action@v2
- name: Login to Github Packages
uses: docker/login-action@v2
with:
registry: ghcr.io
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Build image and push to GitHub Container Registry
uses: docker/build-push-action@v3
with:
# relative path to the place where source code with Dockerfile is located
context: .
push: true
tags: ghcr.io/allenneuraldynamics/aind-qc-portal:latest
update_ecs_service :
runs-on: ubuntu-latest
needs: publish_image
permissions:
id-token: write
contents: read
env:
AWS_IAM_ROLE: ${{ secrets.AWS_IAM_ROLE_PROD }}
AWS_REGION : ${{ vars.AWS_REGION }}
AWS_ECS_CLUSTER : ${{ vars.AWS_ECS_CLUSTER_PROD }}
AWS_ECS_SERVICE : ${{ vars.AWS_ECS_SERVICE_PROD }}
steps:
- uses: actions/checkout@v3
- name: Set up Python 3.10
uses: actions/setup-python@v3
with:
python-version: '3.10'
- name: Configure aws credentials
uses: aws-actions/configure-aws-credentials@v2
with:
role-to-assume: ${{ env.AWS_IAM_ROLE }}
role-session-name: github-ecs-update-service
aws-region: ${{ env.AWS_REGION }}
- name: Update ECS service
run: |
python -m pip install awscli
aws ecs update-service --cluster $AWS_ECS_CLUSTER --service $AWS_ECS_SERVICE --force-new-deployment