Practical, reusable scripts for bioinformatics .
sequence tools for FASTA/Q files: fasta2tab, tab2fasta,
fasta_extract_by_pattern, fasta_common_seqs,
fasta_locate_motif, fasta_remove_duplicates,
fastx_translate, fasta_gc_skew.plot ...
util moved to https://github.com/shenwei356/datakit
plot plot scripts: heatmap ...
blast NCBI BLAST+ wrappers
file_formats genbank->gtf, bam2gff, gff2fa ...
enzyme analysis of restrict enzymes
protein Batch compute pI of protein
biology get insert from sanger sequencing result
for_education scripts with detail comments, for education
not_used older version of some scripts
See README in sub derectories.
Copyright (c) 2014-2015, Wei Shen ([email protected])