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WIP: WGCNA second draft #353

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wants to merge 16 commits into from
Closed

WIP: WGCNA second draft #353

wants to merge 16 commits into from

Commits on Nov 10, 2020

  1. Push a basic draft that doesn't exactly work

    @cansavvy
    cansavvy committed Nov 10, 2020
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Commits on Nov 11, 2020

  1. More words and polishing

    @cansavvy
    cansavvy committed Nov 11, 2020
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  2. Try out some plots

    @cansavvy
    cansavvy committed Nov 11, 2020
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  3. Put some DRAFT and REVIEW designations

    @cansavvy
    cansavvy committed Nov 11, 2020
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  4. Add to Dockerfile

    @cansavvy
    cansavvy committed Nov 11, 2020
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  5. Get rid of umap edit

    @cansavvy
    cansavvy committed Nov 11, 2020
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  6. Add wgcna example to snakefile and run

    @cansavvy
    cansavvy committed Nov 11, 2020
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  7. Move WGCNA to the "advanced topics" folder

    @cansavvy
    cansavvy committed Nov 11, 2020
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  8. remove rna-seq files

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    cansavvy committed Nov 11, 2020
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Commits on Nov 12, 2020

  1. A set up with ANOVA

    @cansavvy
    cansavvy committed Nov 12, 2020
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  2. Use limma instead. Its more straightforward and gives essentially the… 

    … same results
    @cansavvy
    cansavvy committed Nov 12, 2020
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  3. Add ggforce to packages

    @cansavvy
    cansavvy committed Nov 12, 2020
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  4. render it

    @cansavvy
    cansavvy committed Nov 12, 2020
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Commits on Nov 13, 2020

  1. Put draft tags and more words about parameters

    @cansavvy
    cansavvy committed Nov 13, 2020
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  2. Push a rendered notebook

    @cansavvy
    cansavvy committed Nov 13, 2020
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  3. Add to dictionary; fix spellings

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    cansavvy committed Nov 13, 2020
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