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{"documenter":{"julia_version":"1.10.3","generation_timestamp":"2024-05-30T06:51:12","documenter_version":"1.4.1"}}
{"documenter":{"julia_version":"1.10.4","generation_timestamp":"2024-07-16T11:46:48","documenter_version":"1.5.0"}}
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<!DOCTYPE html>
<html lang="en"><head><meta charset="UTF-8"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><title>Performance tips · NCDatasets.jl</title><meta name="title" content="Performance tips · NCDatasets.jl"/><meta property="og:title" content="Performance tips · NCDatasets.jl"/><meta property="twitter:title" content="Performance tips · NCDatasets.jl"/><meta name="description" content="Documentation for NCDatasets.jl."/><meta property="og:description" content="Documentation for NCDatasets.jl."/><meta property="twitter:description" content="Documentation for NCDatasets.jl."/><meta property="og:url" content="https://alexander-barth.github.io/NCDatasets.jl/performance/"/><meta property="twitter:url" content="https://alexander-barth.github.io/NCDatasets.jl/performance/"/><link rel="canonical" href="https://alexander-barth.github.io/NCDatasets.jl/performance/"/><script data-outdated-warner src="../assets/warner.js"></script><link href="https://cdnjs.cloudflare.com/ajax/libs/lato-font/3.0.0/css/lato-font.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/juliamono/0.050/juliamono.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.4.2/css/fontawesome.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.4.2/css/solid.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.4.2/css/brands.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.16.8/katex.min.css" rel="stylesheet" type="text/css"/><script>documenterBaseURL=".."</script><script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js" data-main="../assets/documenter.js"></script><script src="../search_index.js"></script><script src="../siteinfo.js"></script><script src="../../versions.js"></script><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/documenter-dark.css" data-theme-name="documenter-dark" data-theme-primary-dark/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/documenter-light.css" data-theme-name="documenter-light" data-theme-primary/><script src="../assets/themeswap.js"></script></head><body><div id="documenter"><nav class="docs-sidebar"><a class="docs-logo" href="../"><img src="../assets/logo.svg" alt="NCDatasets.jl logo"/></a><div class="docs-package-name"><span class="docs-autofit"><a href="../">NCDatasets.jl</a></span></div><button class="docs-search-query input is-rounded is-small is-clickable my-2 mx-auto py-1 px-2" id="documenter-search-query">Search docs (Ctrl + /)</button><ul class="docs-menu"><li><a class="tocitem" href="../">Introduction</a></li><li><a class="tocitem" href="../dataset/">Datasets</a></li><li><a class="tocitem" href="../dimensions/">Dimensions</a></li><li><a class="tocitem" href="../variables/">Variables</a></li><li><a class="tocitem" href="../attributes/">Attributes</a></li><li class="is-active"><a class="tocitem" href>Performance tips</a></li><li><a class="tocitem" href="../other/">Other features</a></li><li><a class="tocitem" href="../issues/">Known issues</a></li><li><a class="tocitem" href="../tutorials/">Tutorials</a></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><a class="docs-sidebar-button docs-navbar-link fa-solid fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Performance tips</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Performance tips</a></li></ul></nav><div class="docs-right"><a class="docs-navbar-link" href="https://github.com/Alexander-Barth/NCDatasets.jl" title="View the repository on GitHub"><span class="docs-icon fa-brands"></span><span class="docs-label is-hidden-touch">GitHub</span></a><a class="docs-navbar-link" href="https://github.com/Alexander-Barth/NCDatasets.jl/blob/master/docs/src/performance.md" title="Edit source on GitHub"><span class="docs-icon fa-solid"></span></a><a class="docs-settings-button docs-navbar-link fa-solid fa-gear" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-article-toggle-button fa-solid fa-chevron-up" id="documenter-article-toggle-button" href="javascript:;" title="Collapse all docstrings"></a></div></header><article class="content" id="documenter-page"><h1 id="performance_tips"><a class="docs-heading-anchor" href="#performance_tips">Performance tips</a><a id="performance_tips-1"></a><a class="docs-heading-anchor-permalink" href="#performance_tips" title="Permalink"></a></h1><ul><li>Reading data from a file is not type-stable, because the type of the output of the read operation is dependent on the type defined in the NetCDF files and the value of various attribute (like <code>scale_factor</code>, <code>add_offset</code> and <code>units</code> for time conversion). All this information cannot be inferred from a static analysis of the source code. It is therefore recommended to use <a href="https://docs.julialang.org/en/v1/manual/types/index.html#Type-Declarations-1">type annotation</a> if the resulting type of a read operation in known:</li></ul><pre><code class="language-julia hljs">ds = NCDataset(&quot;file.nc&quot;)
<html lang="en"><head><meta charset="UTF-8"/><meta name="viewport" content="width=device-width, initial-scale=1.0"/><title>Performance tips · NCDatasets.jl</title><meta name="title" content="Performance tips · NCDatasets.jl"/><meta property="og:title" content="Performance tips · NCDatasets.jl"/><meta property="twitter:title" content="Performance tips · NCDatasets.jl"/><meta name="description" content="Documentation for NCDatasets.jl."/><meta property="og:description" content="Documentation for NCDatasets.jl."/><meta property="twitter:description" content="Documentation for NCDatasets.jl."/><meta property="og:url" content="https://alexander-barth.github.io/NCDatasets.jl/performance/"/><meta property="twitter:url" content="https://alexander-barth.github.io/NCDatasets.jl/performance/"/><link rel="canonical" href="https://alexander-barth.github.io/NCDatasets.jl/performance/"/><script data-outdated-warner src="../assets/warner.js"></script><link href="https://cdnjs.cloudflare.com/ajax/libs/lato-font/3.0.0/css/lato-font.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/juliamono/0.050/juliamono.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.4.2/css/fontawesome.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.4.2/css/solid.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/6.4.2/css/brands.min.css" rel="stylesheet" type="text/css"/><link href="https://cdnjs.cloudflare.com/ajax/libs/KaTeX/0.16.8/katex.min.css" rel="stylesheet" type="text/css"/><script>documenterBaseURL=".."</script><script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.6/require.min.js" data-main="../assets/documenter.js"></script><script src="../search_index.js"></script><script src="../siteinfo.js"></script><script src="../../versions.js"></script><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/catppuccin-mocha.css" data-theme-name="catppuccin-mocha"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/catppuccin-macchiato.css" data-theme-name="catppuccin-macchiato"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/catppuccin-frappe.css" data-theme-name="catppuccin-frappe"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/catppuccin-latte.css" data-theme-name="catppuccin-latte"/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/documenter-dark.css" data-theme-name="documenter-dark" data-theme-primary-dark/><link class="docs-theme-link" rel="stylesheet" type="text/css" href="../assets/themes/documenter-light.css" data-theme-name="documenter-light" data-theme-primary/><script src="../assets/themeswap.js"></script></head><body><div id="documenter"><nav class="docs-sidebar"><a class="docs-logo" href="../"><img src="../assets/logo.svg" alt="NCDatasets.jl logo"/></a><div class="docs-package-name"><span class="docs-autofit"><a href="../">NCDatasets.jl</a></span></div><button class="docs-search-query input is-rounded is-small is-clickable my-2 mx-auto py-1 px-2" id="documenter-search-query">Search docs (Ctrl + /)</button><ul class="docs-menu"><li><a class="tocitem" href="../">Introduction</a></li><li><a class="tocitem" href="../dataset/">Datasets</a></li><li><a class="tocitem" href="../dimensions/">Dimensions</a></li><li><a class="tocitem" href="../variables/">Variables</a></li><li><a class="tocitem" href="../attributes/">Attributes</a></li><li class="is-active"><a class="tocitem" href>Performance tips</a></li><li><a class="tocitem" href="../other/">Other features</a></li><li><a class="tocitem" href="../issues/">Known issues</a></li><li><a class="tocitem" href="../tutorials/">Tutorials</a></li></ul><div class="docs-version-selector field has-addons"><div class="control"><span class="docs-label button is-static is-size-7">Version</span></div><div class="docs-selector control is-expanded"><div class="select is-fullwidth is-size-7"><select id="documenter-version-selector"></select></div></div></div></nav><div class="docs-main"><header class="docs-navbar"><a class="docs-sidebar-button docs-navbar-link fa-solid fa-bars is-hidden-desktop" id="documenter-sidebar-button" href="#"></a><nav class="breadcrumb"><ul class="is-hidden-mobile"><li class="is-active"><a href>Performance tips</a></li></ul><ul class="is-hidden-tablet"><li class="is-active"><a href>Performance tips</a></li></ul></nav><div class="docs-right"><a class="docs-navbar-link" href="https://github.com/Alexander-Barth/NCDatasets.jl" title="View the repository on GitHub"><span class="docs-icon fa-brands"></span><span class="docs-label is-hidden-touch">GitHub</span></a><a class="docs-navbar-link" href="https://github.com/Alexander-Barth/NCDatasets.jl/blob/master/docs/src/performance.md" title="Edit source on GitHub"><span class="docs-icon fa-solid"></span></a><a class="docs-settings-button docs-navbar-link fa-solid fa-gear" id="documenter-settings-button" href="#" title="Settings"></a><a class="docs-article-toggle-button fa-solid fa-chevron-up" id="documenter-article-toggle-button" href="javascript:;" title="Collapse all docstrings"></a></div></header><article class="content" id="documenter-page"><h1 id="performance_tips"><a class="docs-heading-anchor" href="#performance_tips">Performance tips</a><a id="performance_tips-1"></a><a class="docs-heading-anchor-permalink" href="#performance_tips" title="Permalink"></a></h1><ul><li>Reading data from a file is not type-stable, because the type of the output of the read operation is dependent on the type defined in the NetCDF files and the value of various attribute (like <code>scale_factor</code>, <code>add_offset</code> and <code>units</code> for time conversion). All this information cannot be inferred from a static analysis of the source code. It is therefore recommended to use <a href="https://docs.julialang.org/en/v1/manual/types/index.html#Type-Declarations-1">type annotation</a> if the resulting type of a read operation in known:</li></ul><pre><code class="language-julia hljs">ds = NCDataset(&quot;file.nc&quot;)
nctemp = ds[&quot;temp&quot;]
temp = nctemp[:,:] :: Array{Float32,2}

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v = ds[&quot;v1&quot;][:,1:3,:]; # fast
v = ds[&quot;v1&quot;][:,:,CartesianIndex(1)] # slow
v = ds[&quot;v1&quot;][:,:,1] # fast
close(ds)</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../attributes/">« Attributes</a><a class="docs-footer-nextpage" href="../other/">Other features »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.4.1 on <span class="colophon-date" title="Thursday 30 May 2024 06:51">Thursday 30 May 2024</span>. Using Julia version 1.10.3.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
close(ds)</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../attributes/">« Attributes</a><a class="docs-footer-nextpage" href="../other/">Other features »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.5.0 on <span class="colophon-date" title="Tuesday 16 July 2024 11:46">Tuesday 16 July 2024</span>. Using Julia version 1.10.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
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