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ID Mapper

Identifier mapping

This is a Cytoscape app which allows identifier mapping on tables. Once this app is installed, the table browser will respond to a right click on the column header with a pop-up menu containing the item Map Column...

A dialog is shown to gather the information about the species, and which columns you want to map From (the source) and To (the target). By default, multiple return values will be simplified to the first in the list, but turning off the Force Single checkbox will maintain all returned IDs.

Once the dialog is confirmed, a new column will be added to the Node Table containing the mapped identifiers.

The active service (either Kei's mapping service or BridgeDb) is set in MapColumnTaskFactoryImpl. Line 17 BridgeDB is the default service.

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Identifier mapping

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