Ruff: Run on pyi files (#356)

* Ruff: Run on pyi files

Ensure ruff is actually run on `.pyi` files.
They have a separate type `pyi` but we can just use the defaults, too

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

.pre-commit-config.yaml

@@ -74,25 +74,14 @@ repos:
 # Python: Ruff linter & formatter
 # https://docs.astral.sh/ruff/
 - repo: https://github.com/astral-sh/ruff-pre-commit
- rev: v0.5.6
+ rev: v0.5.7
  hooks:
  # Run the linter
  - id: ruff
  args: [--fix, --exit-non-zero-on-fix]
- types_or: [python, jupyter]
  # Run the formatter
  - id: ruff-format
 
-# Sorts Python imports according to PEP8
-# https://www.python.org/dev/peps/pep-0008/#imports
-# Needed until https://github.com/astral-sh/ruff/issues/12872 is fixed
-- repo: https://github.com/pycqa/isort
- rev: 5.13.2
- hooks:
- - id: isort
- name: isort (python)
- args: ["--profile", "black", "--filter-files"]
-
 # Jupyter Notebooks: clean up all cell outputs
 - repo: https://github.com/roy-ht/pre-commit-jupyter
  rev: v1.2.1

src/amrex/space1d/__init__.pyi

@@ -96,10 +96,7 @@ from amrex.space1d.amrex_1d_pybind import (
  Geometry,
  GeometryData,
  IndexType,
-)
-from amrex.space1d.amrex_1d_pybind import IntVect1D
-from amrex.space1d.amrex_1d_pybind import IntVect1D as IntVect
-from amrex.space1d.amrex_1d_pybind import (
+ IntVect1D,
  IntVect2D,
  IntVect3D,
  MFInfo,
@@ -287,6 +284,7 @@ from amrex.space1d.amrex_1d_pybind import (
  unpack_ids,
  write_single_level_plotfile,
 )
+from amrex.space1d.amrex_1d_pybind import IntVect1D as IntVect
 
 from . import amrex_1d_pybind
 

src/amrex/space2d/__init__.pyi

@@ -97,10 +97,7 @@ from amrex.space2d.amrex_2d_pybind import (
  GeometryData,
  IndexType,
  IntVect1D,
-)
-from amrex.space2d.amrex_2d_pybind import IntVect2D
-from amrex.space2d.amrex_2d_pybind import IntVect2D as IntVect
-from amrex.space2d.amrex_2d_pybind import (
+ IntVect2D,
  IntVect3D,
  MFInfo,
  MFIter,
@@ -311,6 +308,7 @@ from amrex.space2d.amrex_2d_pybind import (
  unpack_ids,
  write_single_level_plotfile,
 )
+from amrex.space2d.amrex_2d_pybind import IntVect2D as IntVect
 
 from . import amrex_2d_pybind
 

src/amrex/space3d/__init__.pyi

@@ -98,10 +98,7 @@ from amrex.space3d.amrex_3d_pybind import (
  IndexType,
  IntVect1D,
  IntVect2D,
-)
-from amrex.space3d.amrex_3d_pybind import IntVect3D
-from amrex.space3d.amrex_3d_pybind import IntVect3D as IntVect
-from amrex.space3d.amrex_3d_pybind import (
+ IntVect3D,
  MFInfo,
  MFIter,
  MFItInfo,
@@ -287,6 +284,7 @@ from amrex.space3d.amrex_3d_pybind import (
  unpack_ids,
  write_single_level_plotfile,
 )
+from amrex.space3d.amrex_3d_pybind import IntVect3D as IntVect
 
 from . import amrex_3d_pybind