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added links to other pipelines in derivatives and pipelines markdown …
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Eric Feczko committed Jun 29, 2021
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7 changes: 6 additions & 1 deletion docs/derivatives.md
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## 1. About this Document

This document reports and describes the derivative files containing processed data that are in this NDA collection. All BIDS derivative record data types within this document are written in `monospace` font. They are prefaced by their short names.
This document reports and describes the derivative files containing processed data that are in the `abcd-hcp-pipeline` and `freesurfer-5.3.0-HCP` derivative folders from the ABCC. All BIDS derivative record data types within this document are written in `monospace` font. They are prefaced by their short names. References for other derivatives from pipelines like:

1. [fMRIPrep](https://fmriprep.org/)
1. [QSIPrep](https://qsiprep.readthedocs.io/en/stable/)

can be found by clicking on their respective links.

## 2. Derivative Data Subsets Breakdown

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8 changes: 7 additions & 1 deletion docs/pipeline.md
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## 1. About this Document

This document lightly describes the ABCD-BIDS pipeline used to process the BIDS input data and output the BIDS derivative data.
This document lightly describes the ABCD-BIDS pipeline used to process the BIDS input data and output the BIDS derivative data.

Documentation for other pipelines such as:
1. [fMRIPrep](https://fmriprep.org/)
1. [QSIPrep](https://qsiprep.readthedocs.io/en/stable/)

can be found by clicking on their respective links.

## 2. Pipeline Overview

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