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Merge pull request #711 from adithyaakrishna/feat/Search
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feat: Added Search Feature and Updated Theme
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dkoes authored Aug 30, 2023
2 parents c13a0d6 + abd7314 commit 9c041f7
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21 changes: 11 additions & 10 deletions doc.md
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</script>

3Dmol.js is an object-oriented, WebGL based JavaScript library for online molecular visualization - No Java required!
With 3Dmol.js, you can add beautifully rendered molecular visualizations to your web applications. Features include:
With 3Dmol.js, you can add beautifully rendered molecular visualizations to your web applications.

* support for pdb, sdf, mol2, xyz, and cube formats
* parallelized molecular surface computation
* sphere, stick, line, cross, cartoon, and surface styles
* atom property based selection and styling
* labels
* clickable interactivity with molecular data
* geometric shapes including spheres and arrows
Features include:

- Support for pdb, sdf, mol2, xyz, and cube formats
- Parallelized molecular surface computation
- Sphere, stick, line, cross, cartoon, and surface styles
- Atom property based selection and styling
- Labels
- Clickable interactivity with molecular data
- Geometric shapes including spheres and arrows

## Getting Started

Molecular data can be shared and visualized without writing any HTML
using only a declarative URL specification and our hosted viewer (see {@tutorial url}).
Molecular data can be shared and visualized without writing any HTML using only a declarative URL specification and our hosted viewer (see {@tutorial url}).

Viewers can be quickly embedded in any HTML document using just two lines of source code (see {@tutorial embeddable}).

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75 changes: 51 additions & 24 deletions jsdoc.conf.json
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"tags": {
"allowUnknownTags": true
},
"plugins": ["plugins/markdown",
"../../node_modules/better-docs/typescript",
"../../node_modules/better-docs/category"],
"plugins": [
"plugins/markdown",
"../../node_modules/better-docs/typescript",
"../../node_modules/better-docs/category"
],
"recurseDepth": 10,
"source": {
"includePattern": "\\.(jsx|js|ts|tsx)$"
},
"templates": {
"search": true,
"cleverLinks": true,
"monospaceLinks": false,
"footer": "",
"copyright":"3Dmol.js © 2019-2023",
"linenums" : true,
"collapseSymbols" : false,
"inverseNav" : true,
"highlightTutorialCode" : true,
"better-docs": {
"name": "<a href=\"http://3dmol.org\"><b>3Dmol</b>.js</a><script async src=\"https://cse.google.com/cse.js?cx=5192956647d8a4a4b\"></script><div class=\"gcse-search\"></div>",
"title": "3Dmol.js Documentation",
"css": "../tutorials/style.css",
"navLinks": [
{
"label": "Github",
"href": "https://github.com/3dmol/3Dmol.js"
}
]
}
"highlightTutorialCode" : true
},
"markdown" : {
"parser" : "gfm",
"hardwrap" : true
"hardwrap": true,
"idInHeadings": true
},
"opts":{
"recurse": true,
"encoding": "utf8",
"template": "./node_modules/better-docs",
"destination": "doc",
"tutorials": "tutorials",
"search": true
},
"tutorials": "tutorials/"
"destination": "doc/",
"recurse": true,
"verbose": true,
"template": "./node_modules/clean-jsdoc-theme",
"copyright": "3Dmol.js © 2019-2023",
"theme_opts": {
"default_theme": "light",
"includeFilesListInHomepage": true,
"homepageTitle": "3Dmol.js",
"displayModuleHeader": true,
"footer":"3Dmol.js © 2019-2023 | <a href='https://pitt.edu/' target='_blank'>University of Pittsburgh</a> | <a href='https://github.com/3dmol/3Dmol.js/blob/master/LICENSE' target='_blank'>License</a>",
"title": "3Dmol.js",
"create_style": "article ul li { list-style: disc}",
"menu": [
{
"title": " Documentation",
"link": "https://3dmol.org/doc/index.html"
},
{
"title": "Tutorials",
"link": "tutorial-home.html"
},
{
"title": "GitHub",
"link": "https://github.com/3dmol/3Dmol.js",
"target": "_blank"
}
],
"meta": [
{
"name": "Author",
"content": "David Koes & 3Dmoljs Contributors"
},
{
"name": "Description",
"content": "A modern, object-oriented JavaScript library for visualizing molecular data"
}
]
},
"tutorials": "tutorials/"
}
}
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