NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(log1p,exp.vec)
S3method(plot,lcm_tree)
S3method(predict,blca)
S3method(predict,lcm_tree)
S3method(print,lcm_tree)
S3method(print,summary.lcm_tree_compact)
S3method(print,summary.lcm_tree_long)
S3method(summary,lcm_tree)
export(approx_sb)
export(compute_misrate)
export(compute_params)
export(design_tree)
export(expit)
export(fit_lcm_tree)
export(g_fun)
export(g_fun.vec)
export(g_fun0)
export(get_est_cpp)
export(get_moments_cpp)
export(initialize_tree_lcm)
export(lca_ll)
export(lcm_by_group)
export(lcm_tree)
export(log1p_exp)
export(logexpit)
export(logit)
export(lotR_blca)
export(lower_bd)
export(make_list)
export(mexpit)
export(opt_colpermB)
export(permutations)
export(plot_est_resp)
export(plot_noncir)
export(prob2stick)
export(rmse_bias_AB)
export(simulate_lcm_tree)
export(split_along_dim)
export(tree_lca_ll)
export(tsb)
export(update_gamma_alpha_subid)
export(update_gamma_alpha_subid_separate_tau)
export(update_hyperparams)
export(update_rmat)
export(update_rmat_partial)
export(update_vi_params)
export(xlogx)
import(ggplot2)
import(ggtree)
import(igraph)
importFrom(BayesLCA,blca)
importFrom(BayesLCA,unMAP)
importFrom(RColorBrewer,brewer.pal)
importFrom(Rcpp,sourceCpp)
importFrom(ape,as.phylo)
importFrom(ggplot2,scale_fill_gradientn)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,topo.colors)
importFrom(graphics,abline)
importFrom(graphics,barplot)
importFrom(graphics,image)
importFrom(igraph,E)
importFrom(igraph,V)
importFrom(matrixStats,logSumExp)
importFrom(reshape2,melt)
importFrom(stats,median)
importFrom(stats,rmultinom)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,setNames)
useDynLib(lotR)