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2024-01-22-Jan24-Week03-Goals.md

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WIN 24 Week 03 Goals
2024-01-12
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Goals for Week 03 of Winter 2024...

CEABiGR oyster lncRNA

  • Update methods section of manuscript with WGCNA and get the results section going for differential expression and size
  • Lab notebook update post about WGCNA run for females and generated figures
  • Run WGCNA for males lncRNA
    • Summary & figures: # of modules, cluster dendrogram, module significance, interesting modules to investigate further ; lab notebook post
  • Touch base with Ariana about lncRNA WGCNA in an issue

e5 coral 3 species lncRNA

  • Lit review for conserved region analysis
  • Final results of hits between species
  • Pull transcript IDs hits between species
  • Pull hits for hits between species and reference RNAcentral ID to get actual annotation

Olympia oyster pop gen

  • Touch base with Mac over email to define steps for putting together analysis
  • Get pre-existing repo and any coding that has already been done
  • Create repo
  • Get data on Raven

Additional Goals

  • Gather and write remaining Pop Dy Fellowship app components
    • Upload all materials for Lisa to review by Wednesday
    • Submit app by Jan 25 @ 5pm