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Can this code be used for smart-seq2 data converted to Seurat object? #2

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levinhein opened this issue Oct 19, 2020 · 1 comment
Open

Can this code be used for smart-seq2 data converted to Seurat object? #2

levinhein opened this issue Oct 19, 2020 · 1 comment

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@levinhein
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Hello. Can this code be used for smart-seq2 data converted to Seurat object? Do you have a vignette starting from row genes x column cells data object? Thank you!
@yuifu
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yuifu commented Oct 21, 2020

@levinhein You need BAM files and BigWig files to run codes for recursive splicing and enhancer RNA, respectively.

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@yuifu @levinhein