From 8205e66751a21e55e062251cf79fa69b11e4a2c3 Mon Sep 17 00:00:00 2001 From: Yasemin Bridges Date: Mon, 13 May 2024 00:08:07 +0100 Subject: [PATCH] add score argument --- .../post_process/post_process_results_format.py | 1 + 1 file changed, 1 insertion(+) diff --git a/src/pheval_ai_marrvel/post_process/post_process_results_format.py b/src/pheval_ai_marrvel/post_process/post_process_results_format.py index a783ebd..aba8417 100644 --- a/src/pheval_ai_marrvel/post_process/post_process_results_format.py +++ b/src/pheval_ai_marrvel/post_process/post_process_results_format.py @@ -124,6 +124,7 @@ def extract_pheval_variant_requirements(self) -> List[PhEvalVariantResult]: for result_entry in self.raw_result.rows(named=True): pheval_result.append( PhEvalVariantResult( + score=self._obtain_score(result_entry), chromosome=self.obtain_chrom(result_entry["variant"]), start=self.obtain_pos(result_entry["variant"]), end=calculate_end_pos(