From 61f46d57899a9c9eee60e264af6cf26de95d1cf1 Mon Sep 17 00:00:00 2001 From: yao-lzy Date: Thu, 21 Dec 2023 16:14:01 -0500 Subject: [PATCH] fold change --- 01-metadata.Rmd => docs/01-metadata.Rmd | 0 02-omics-data.Rmd => docs/02-omics-data.Rmd | 0 .../03-statistical-analysis-.Rmd | 0 README.md => docs/README.md | 0 docs/{ => _book}/404.html | 0 docs/{ => _book}/index.html | 45 +-- .../anchor-sections-hash.css | 0 .../anchor-sections-1.1.0/anchor-sections.css | 0 .../anchor-sections-1.1.0/anchor-sections.js | 0 .../css/fontawesome/fontawesome-webfont.ttf | Bin .../gitbook-2.6.7/css/plugin-bookdown.css | 0 .../gitbook-2.6.7/css/plugin-clipboard.css | 0 .../gitbook-2.6.7/css/plugin-fontsettings.css | 0 .../gitbook-2.6.7/css/plugin-highlight.css | 0 .../libs/gitbook-2.6.7/css/plugin-search.css | 0 .../libs/gitbook-2.6.7/css/plugin-table.css | 0 .../libs/gitbook-2.6.7/css/style.css | 0 .../_book}/libs/gitbook-2.6.7/js/app.min.js | 0 .../libs/gitbook-2.6.7/js/clipboard.min.js | 0 .../libs/gitbook-2.6.7/js/jquery.highlight.js | 0 .../libs/gitbook-2.6.7/js/plugin-bookdown.js | 0 .../libs/gitbook-2.6.7/js/plugin-clipboard.js | 0 .../gitbook-2.6.7/js/plugin-fontsettings.js | 0 .../libs/gitbook-2.6.7/js/plugin-search.js | 0 .../libs/gitbook-2.6.7/js/plugin-sharing.js | 0 .../libs/jquery-3.6.0/jquery-3.6.0.min.js | 0 .../overview-of-metadata-types.html | 0 .../overview-of-omics-data-types.html | 0 ...rview-of-statistical-analysis-methods.html | 0 docs/{ => _book}/reference-keys.txt | 0 docs/{ => _book}/search_index.json | 0 style.css => docs/_book/style.css | 0 _bookdown.yml => docs/_bookdown.yml | 0 _output.yml => docs/_output.yml | 0 book.bib => docs/book.bib | 0 index.Rmd => docs/index.Rmd | 0 docs/libs/.DS_Store | Bin 6148 -> 0 bytes docs/libs/gitbook-2.6.7/.DS_Store | Bin 6148 -> 0 bytes docs/libs/gitbook-2.6.7/js/app.min.js | 1 - docs/libs/gitbook-2.6.7/js/clipboard.min.js | 7 - .../libs/gitbook-2.6.7/js/jquery.highlight.js | 86 ------ docs/libs/gitbook-2.6.7/js/plugin-bookdown.js | 259 ----------------- .../libs/gitbook-2.6.7/js/plugin-clipboard.js | 33 --- .../gitbook-2.6.7/js/plugin-fontsettings.js | 152 ---------- docs/libs/gitbook-2.6.7/js/plugin-search.js | 270 ------------------ docs/libs/gitbook-2.6.7/js/plugin-sharing.js | 116 -------- docs/libs/jquery-3.6.0/jquery-3.6.0.min.js | 2 - preamble.tex => docs/preamble.tex | 0 48 files changed, 25 insertions(+), 946 deletions(-) rename 01-metadata.Rmd => docs/01-metadata.Rmd (100%) rename 02-omics-data.Rmd => docs/02-omics-data.Rmd (100%) rename 03-statistical-analysis-.Rmd => docs/03-statistical-analysis-.Rmd (100%) rename README.md => docs/README.md (100%) rename docs/{ => _book}/404.html (100%) rename docs/{ => _book}/index.html (79%) rename docs/{ => _book}/libs/anchor-sections-1.1.0/anchor-sections-hash.css (100%) rename docs/{ => _book}/libs/anchor-sections-1.1.0/anchor-sections.css (100%) rename docs/{ => _book}/libs/anchor-sections-1.1.0/anchor-sections.js (100%) rename docs/{ => _book}/libs/gitbook-2.6.7/css/fontawesome/fontawesome-webfont.ttf (100%) rename docs/{ => _book}/libs/gitbook-2.6.7/css/plugin-bookdown.css (100%) rename docs/{ => _book}/libs/gitbook-2.6.7/css/plugin-clipboard.css (100%) rename docs/{ => _book}/libs/gitbook-2.6.7/css/plugin-fontsettings.css (100%) rename docs/{ => _book}/libs/gitbook-2.6.7/css/plugin-highlight.css (100%) rename docs/{ => _book}/libs/gitbook-2.6.7/css/plugin-search.css (100%) rename docs/{ => _book}/libs/gitbook-2.6.7/css/plugin-table.css (100%) rename docs/{ => _book}/libs/gitbook-2.6.7/css/style.css (100%) rename {_book => docs/_book}/libs/gitbook-2.6.7/js/app.min.js (100%) rename {_book => docs/_book}/libs/gitbook-2.6.7/js/clipboard.min.js (100%) rename {_book => docs/_book}/libs/gitbook-2.6.7/js/jquery.highlight.js (100%) rename {_book => docs/_book}/libs/gitbook-2.6.7/js/plugin-bookdown.js (100%) rename {_book => docs/_book}/libs/gitbook-2.6.7/js/plugin-clipboard.js (100%) rename {_book => docs/_book}/libs/gitbook-2.6.7/js/plugin-fontsettings.js (100%) rename {_book => docs/_book}/libs/gitbook-2.6.7/js/plugin-search.js (100%) rename {_book => docs/_book}/libs/gitbook-2.6.7/js/plugin-sharing.js (100%) rename {_book => docs/_book}/libs/jquery-3.6.0/jquery-3.6.0.min.js (100%) rename docs/{ => _book}/overview-of-metadata-types.html (100%) rename docs/{ => _book}/overview-of-omics-data-types.html (100%) rename docs/{ => _book}/overview-of-statistical-analysis-methods.html (100%) rename docs/{ => _book}/reference-keys.txt (100%) rename docs/{ => _book}/search_index.json (100%) rename style.css => docs/_book/style.css (100%) rename _bookdown.yml => docs/_bookdown.yml (100%) rename _output.yml => docs/_output.yml (100%) rename book.bib => docs/book.bib (100%) rename index.Rmd => docs/index.Rmd (100%) delete mode 100644 docs/libs/.DS_Store delete mode 100644 docs/libs/gitbook-2.6.7/.DS_Store delete mode 100644 docs/libs/gitbook-2.6.7/js/app.min.js delete mode 100644 docs/libs/gitbook-2.6.7/js/clipboard.min.js delete mode 100644 docs/libs/gitbook-2.6.7/js/jquery.highlight.js delete mode 100644 docs/libs/gitbook-2.6.7/js/plugin-bookdown.js delete mode 100644 docs/libs/gitbook-2.6.7/js/plugin-clipboard.js delete mode 100644 docs/libs/gitbook-2.6.7/js/plugin-fontsettings.js delete mode 100644 docs/libs/gitbook-2.6.7/js/plugin-search.js delete mode 100644 docs/libs/gitbook-2.6.7/js/plugin-sharing.js delete mode 100644 docs/libs/jquery-3.6.0/jquery-3.6.0.min.js rename preamble.tex => docs/preamble.tex (100%) diff --git a/01-metadata.Rmd b/docs/01-metadata.Rmd similarity index 100% rename from 01-metadata.Rmd rename to docs/01-metadata.Rmd diff --git a/02-omics-data.Rmd b/docs/02-omics-data.Rmd similarity index 100% rename from 02-omics-data.Rmd rename to docs/02-omics-data.Rmd diff --git a/03-statistical-analysis-.Rmd b/docs/03-statistical-analysis-.Rmd similarity index 100% rename from 03-statistical-analysis-.Rmd rename to docs/03-statistical-analysis-.Rmd diff --git a/README.md b/docs/README.md similarity index 100% rename from README.md rename to docs/README.md diff --git a/docs/404.html b/docs/_book/404.html similarity index 100% rename from docs/404.html rename to docs/_book/404.html diff --git a/docs/index.html b/docs/_book/index.html similarity index 79% rename from docs/index.html rename to docs/_book/index.html index 2c36226..eead0ed 100644 --- a/docs/index.html +++ b/docs/_book/index.html @@ -32,21 +32,26 @@ - + - - - - - - - + + + + + + + - - - + + + + + + + + @@ -55,7 +60,7 @@ div.hanging-indent{margin-left: 1.5em; text-indent: -1.5em;} - + @@ -146,14 +151,14 @@

Chapter 1 General Introduction - - - - - - - - + + + + + + + +