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quibl_17samples}/chr16nr.17samples.raxml.rooted.bestTree (100%) create mode 100644 QuIBL analysis/data/quibl_17samples/chr16nr_17samples_quiblr_introgression_summary.csv rename QuIBL analysis/data/{ => quibl_17samples}/quibl_17samples_input.txt (100%) diff --git a/QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/10177at7399.raxml.bestTree b/QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/10177at7399.raxml.bestTree new file mode 100644 index 0000000..702dbc4 --- /dev/null +++ b/QuIBL analysis/data/quibl_17samples/17samples.besttrees_chr16nr/10177at7399.raxml.bestTree @@ -0,0 +1 @@ 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+"SRR9008214-meg-130-BZ-bigB","SRR9008214-meg-130-BZ-bigB",0 +"SRR9008214-meg-130-BZ-bigB","SRR9008214-meg-130-BZ-bigB",0 +"SRR9008214-meg-130-BZ-bigB","SRR9008167-meg-127-BZ-littleb",0 +"SRR9008167-meg-127-BZ-littleb","SRR9008214-meg-130-BZ-bigB",0 +"SRR9008167-meg-127-BZ-littleb","SRR9008167-meg-127-BZ-littleb",0 +"SRR9008167-meg-127-BZ-littleb","SRR9008167-meg-127-BZ-littleb",0 +"GCa3-9-littleb-p","GCa3-9-littleb-p",0 +"GCa3-9-littleb-p","GCa3-9-littleb-p",0 +"GCa3-9-littleb-p","GCa3-11-bigB-p",0 +"GCa3-11-bigB-p","GCa3-9-littleb-p",0 +"GCa3-11-bigB-p","GCa3-11-bigB-p",0 +"GCa3-11-bigB-p","GCa3-11-bigB-p",0 +"SRR9008168-xAdR-135-Pos-littleb","SRR9008168-xAdR-135-Pos-littleb",0 +"SRR9008168-xAdR-135-Pos-littleb","SRR9008168-xAdR-135-Pos-littleb",0 +"SRR9008168-xAdR-135-Pos-littleb","SRR9008232-xAdR-134-Bra-bigB",0 +"SRR9008232-xAdR-134-Bra-bigB","SRR9008168-xAdR-135-Pos-littleb",0 +"SRR9008232-xAdR-134-Bra-bigB","SRR9008232-xAdR-134-Bra-bigB",0 +"SRR9008232-xAdR-134-Bra-bigB","SRR9008232-xAdR-134-Bra-bigB",0 +"SRR9008136-ric-74-Ros-littleb","SRR9008136-ric-74-Ros-littleb",0 +"SRR9008136-ric-74-Ros-littleb","SRR9008136-ric-74-Ros-littleb",0 +"SRR9008136-ric-74-Ros-littleb","SRR9008197-ric-96-Ros-bigB",0 +"SRR9008197-ric-96-Ros-bigB","SRR9008136-ric-74-Ros-littleb",0 +"SRR9008197-ric-96-Ros-bigB","SRR9008197-ric-96-Ros-bigB",0 +"SRR9008197-ric-96-Ros-bigB","SRR9008197-ric-96-Ros-bigB",0 +"SRR9008163-inv-225-Mis-littleb","SRR9008163-inv-225-Mis-littleb",0 +"SRR9008163-inv-225-Mis-littleb","SRR9008163-inv-225-Mis-littleb",0 +"SRR9008163-inv-225-Mis-littleb","SRR9008275-inv-223-Cor-bigB",0 +"SRR9008275-inv-223-Cor-bigB","SRR9008163-inv-225-Mis-littleb",0 +"SRR9008275-inv-223-Cor-bigB","SRR9008275-inv-223-Cor-bigB",0 +"SRR9008275-inv-223-Cor-bigB","SRR9008275-inv-223-Cor-bigB",0 +"GCa8-9-littleb-p","GCa8-9-littleb-p",0 +"GCa8-9-littleb-p","GCa8-9-littleb-p",0 diff --git a/QuIBL analysis/data/quibl_17samples_input.txt b/QuIBL analysis/data/quibl_17samples/quibl_17samples_input.txt similarity index 100% rename from QuIBL analysis/data/quibl_17samples_input.txt rename to QuIBL analysis/data/quibl_17samples/quibl_17samples_input.txt