Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Support for mouse #1

Open
gkc251 opened this issue Aug 29, 2023 · 5 comments
Open

Support for mouse #1

gkc251 opened this issue Aug 29, 2023 · 5 comments

Comments

@gkc251
Copy link

gkc251 commented Aug 29, 2023

Impressive work! Do you have any plan to extend this package for mouse immune cells annotation?

@Yingjiang17
Copy link
Collaborator

Hi@gkc251,thank you for your attention. We are currently planning to improve the annotation performance of sc-ImmuCC in the third layer. Mouse immune cells annotation may be added in the future.

@marencc
Copy link

marencc commented Oct 30, 2023

HI, I am also interested in mouse, are you planning to add this feature?
Many thanks

@Yingjiang17
Copy link
Collaborator

Hi@marencc! Thanks for your attention. We are planning to develop an easy-to-use web-server right now. Mouse immune cell annotation may be added in the future.

@mariecrane
Copy link

@marencc , @gkc251 I was able to use scImmuCC on my mouse data by converting my mouse gene names to the homologous genes in the human genome. I'm not 100% confident in the results since scImmuCC was not optimized for mouse tissue but it gave somewhere to start!

@matt-gust
Copy link

Hi there, great tool! Are there any updates on extending this tool to include mouse genes? Thanks!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

5 participants