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The plugin header file can be checked to retrieve the plugin slug.
This works well for normal plugins that were moved into the mu-plugins folder and an MU-loader system like the one from Bedrock or WP-Starter takes care of actually loading them.
It won't work so well for:
Individual plugin files that were put there just to trigger the loading of a subfolder plugin.
Individual plugin files that contain custom logic for that site.
For now, we should throw warnings when 1. or 2. are found, as erroring out would make MU-plugins mostly unusable in terms of checksum verification.
As discussed in #26 (comment) , the plugin checksum verification currently ignores must-use plugins.
Should these be checked by default? ... or only through an additional flag?
I think I'd prefer to have them be included in the checks by default, with a flag to omit them if they should cause trouble.
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