fillPeaks function enhancement ChromPeakAreaParam

[yguitton]

Hi,

A new way of using fillpeaks is present in xcms and might be intersting to update the wrapper. See
#https://community.france-bioinformatique.fr/t/fillchrompeaks-parameters/3425

xcms_fillpeaks.r :

tools-metabolomics/tools/xcms/xcms_fillpeaks.r

Line 83 in e918326

xdata <- fillChromPeaks(xdata, param = fillChromPeaksParam)

In abims_xcms_fillpeaks.xml : maybe add a new section in advanced mode

tools-metabolomics/tools/xcms/abims_xcms_fillPeaks.xml

Line 18 in e918326

## Advanced

if anyone find time to implement and test it would be cool
Yann

[thcontini1]

Hello,
Do you have some news about this enhancement?

Thanks

[yguitton]

Hi @thcontini1

No one have started the implementation. If you are at ease with github and Galaxy you can do the modification and push a PR with the addition of this new parameter

Yann