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Request: a dedicated tool to generate the sampleMetadata #113

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lecorguille opened this issue Oct 9, 2018 · 2 comments
Open

Request: a dedicated tool to generate the sampleMetadata #113

lecorguille opened this issue Oct 9, 2018 · 2 comments

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@lecorguille
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@melpetera @jfrancoismartin @yguitton

@lecorguille
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#115

@melpetera
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Hi @lecorguille

With @nlenuzza we were talking about information concerning samples that is available in R after findChromPeak and that would be very usefull to extract at an early stage (i.e. after findChromPeaks and before grougChromPeaks). These info are available per sample in the xdata object.

Since this brand new sampleMetadata tool is out and generates a sampleMetadata file, we were wondering if it would be possible (well, we known it is ;) ) to get these interesting info as additionnal columns in the reddy-to-complete sampleMetadata file generated by this tool. We are talking about things like number of peaks in each sample.

We are available to discuss about it ;)
Thank you for your time!

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