scheduled_gpml_sync.yml

name: Daily sync of GPML from classic site

on:
  workflow_dispatch:
  schedule:
  - cron: "0 2 * * *"

concurrency:
  group: ${{ github.workflow }}-${{ github.head_ref || github.ref }}
  cancel-in-progress: true # to cancel a run if another is triggered

jobs:
  classic-sync:
    runs-on: ubuntu-latest
    steps:
        
      - name: Checkout wikipathways-database repo
        uses: actions/checkout@v3
        with:
          persist-credentials: false
          token: ${{ secrets.PICOPAT }}
          fetch-depth: 0
          ref: main
          
      - name: Setup Java
        uses: actions/setup-java@v3
        with:
          distribution: 'temurin'
          java-version: '8'
            
      - name: Cache gpml-sync-action
        uses: actions/cache@v3
        id: cacheSyncJar
        with:
          path: ./SyncAction.jar
          key: cached-gpml-sync-action-${{ hashFiles('SyncAction.jar') }}
          restore-keys: |
            cached-gpml-sync-action-${{ hashFiles('SyncAction.jar') }}
            cached-gpml-sync-action-
    
      - if: steps.cacheSyncJar.outputs.cache-hit != 'true'
        name: Install jar
        run: |
          echo "Cache not found: cached-gpml-sync-action"
          if [ ! -e ./SyncAction.jar ]; then
            wget -O SyncAction.jar https://github.com/wikipathways/gpml-sync-action/releases/download/v1.0/SyncAction.jar
          fi
      
      - name: Run SyncAction
        run: |
          chmod 777 SyncAction.jar
          SyncDate=$(date --utc +%Y%m%d%H%M%S -d "1 day ago")
          echo $SyncDate
          java -jar SyncAction.jar $SyncDate
      
      - name: Commit report
        run: |
          git config --global user.name 'GitHub Action'
          git config --global user.email 'action@github.com'
          git add pathways/WP*/WP*.gpml
          if git diff --exit-code --staged; then
              echo "No changes"
          else
              git commit -m 'Process GPML changes'
              git pull --rebase
          fi
      
      - name: Push as user
        uses: ad-m/github-push-action@master
        with:
          github_token: ${{ secrets.PICOPAT}}