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DE_analysis.yml
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name: test
channels:
- r
- defaults
- conda-forge
- bioconda
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- _r-mutex=1.0.0=anacondar_1
- _sysroot_linux-64_curr_repodata_hack=3=haa98f57_10
- agat=1.0.0=pl5321hdfd78af_0
- alsa-lib=1.2.3.2=h166bdaf_0
- anyio=3.5.0=py310h06a4308_0
- argon2-cffi=21.3.0=pyhd3eb1b0_0
- argon2-cffi-bindings=21.2.0=py310h7f8727e_0
- asttokens=2.0.5=pyhd3eb1b0_0
- attr=2.5.1=h166bdaf_1
- attrs=22.1.0=py310h06a4308_0
- backcall=0.2.0=pyhd3eb1b0_0
- beautifulsoup4=4.11.1=py310h06a4308_0
- binutils_impl_linux-64=2.39=h6ceecb4_0
- binutils_linux-64=2.39=h5fc0e48_11
- bioconductor-annotate=1.72.0=r41hdfd78af_0
- bioconductor-annotationdbi=1.56.2=r41hdfd78af_0
- bioconductor-apeglm=1.16.0=r41hc247a5b_2
- bioconductor-biobase=2.54.0=r41hc0cfd56_2
- bioconductor-biocfilecache=2.2.0=r41hdfd78af_0
- bioconductor-biocgenerics=0.40.0=r41hdfd78af_0
- bioconductor-biocio=1.4.0=r41hdfd78af_0
- bioconductor-biocparallel=1.28.3=r41hc247a5b_1
- bioconductor-biomart=2.50.0=r41hdfd78af_0
- bioconductor-biostrings=2.62.0=r41hc0cfd56_2
- bioconductor-ctc=1.68.0=r41hdfd78af_0
- bioconductor-delayedarray=0.20.0=r41hc0cfd56_2
- bioconductor-deseq2=1.34.0=r41hc247a5b_3
- bioconductor-dexseq=1.40.0=r41hdfd78af_0
- bioconductor-edger=3.36.0=r41hc247a5b_2
- bioconductor-genefilter=1.76.0=r41h38f54d8_2
- bioconductor-genelendatabase=1.30.0=r41hdfd78af_1
- bioconductor-geneplotter=1.72.0=r41hdfd78af_0
- bioconductor-genomeinfodb=1.30.1=r41hdfd78af_0
- bioconductor-genomeinfodbdata=1.2.7=r41hdfd78af_2
- bioconductor-genomicalignments=1.30.0=r41hc0cfd56_2
- bioconductor-genomicfeatures=1.46.1=r41hdfd78af_0
- bioconductor-genomicranges=1.46.1=r41hc0cfd56_1
- bioconductor-go.db=3.14.0=r41hdfd78af_1
- bioconductor-goseq=1.46.0=r41hdfd78af_0
- bioconductor-iranges=2.28.0=r41hc0cfd56_2
- bioconductor-keggrest=1.34.0=r41hdfd78af_0
- bioconductor-limma=3.50.3=r41hc0cfd56_0
- bioconductor-matrixgenerics=1.6.0=r41hdfd78af_0
- bioconductor-qvalue=2.26.0=r41hdfd78af_0
- bioconductor-rhtslib=1.26.0=r41hc0cfd56_2
- bioconductor-rsamtools=2.10.0=r41hc247a5b_2
- bioconductor-rtracklayer=1.54.0=r41h171f361_4
- bioconductor-s4vectors=0.32.4=r41hc0cfd56_0
- bioconductor-seqlogo=1.60.0=r41hdfd78af_0
- bioconductor-summarizedexperiment=1.24.0=r41hdfd78af_0
- bioconductor-xvector=0.34.0=r41hc0cfd56_2
- bioconductor-zlibbioc=1.40.0=r41hc0cfd56_2
- bleach=4.1.0=pyhd3eb1b0_0
- boost-cpp=1.74.0=h6cacc03_7
- bowtie=1.3.1=py310h4070885_4
- bowtie2=2.5.0=py310h8d7afc0_0
- brotli=1.0.9=h166bdaf_8
- brotli-bin=1.0.9=h166bdaf_8
- brotlipy=0.7.0=py310h5764c6d_1005
- bwidget=1.9.11=1
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2022.12.7=ha878542_0
- cairo=1.16.0=ha12eb4b_1010
- certifi=2022.12.7=pyhd8ed1ab_0
- cffi=1.15.1=py310h255011f_2
- charset-normalizer=2.1.1=pyhd8ed1ab_0
- click=8.0.4=py310h06a4308_0
- colorama=0.4.6=pyhd8ed1ab_0
- coloredlogs=15.0.1=py310h06a4308_1
- colormath=3.0.0=py_2
- comm=0.1.2=py310h06a4308_0
- commonmark=0.9.1=pyhd3eb1b0_0
- conda=22.9.0=py310hff52083_2
- conda-package-handling=1.9.0=py310h5764c6d_1
- contourpy=1.0.6=py310hbf28c38_0
- coreutils=8.32=h7b6447c_0
- cryptography=38.0.4=py310h9ce1e76_0
- curl=7.86.0=h5eee18b_0
- cycler=0.11.0=pyhd8ed1ab_0
- dataclasses=0.8=pyh6d0b6a4_7
- dbus=1.13.6=h5008d03_3
- debugpy=1.5.1=py310h295c915_0
- decorator=5.1.1=pyhd3eb1b0_0
- defusedxml=0.7.1=pyhd3eb1b0_0
- entrypoints=0.4=py310h06a4308_0
- executing=0.8.3=pyhd3eb1b0_0
- expat=2.5.0=h27087fc_0
- fastqc=0.11.9=hdfd78af_1
- fftw=3.3.10=nompi_hf0379b8_106
- flit-core=3.6.0=pyhd3eb1b0_0
- fmt=9.1.0=h924138e_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.14.1=hc2a2eb6_0
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- fonttools=4.38.0=py310h5764c6d_1
- freetype=2.12.1=hca18f0e_1
- fribidi=1.0.10=h7b6447c_0
- future=0.18.2=py310h06a4308_1
- gcc_impl_linux-64=10.4.0=h5231bdf_19
- gcc_linux-64=10.4.0=h9215b83_11
- gdbm=1.18=hd4cb3f1_4
- gettext=0.21.1=h27087fc_0
- gfortran_impl_linux-64=10.4.0=h7d168d2_19
- gfortran_linux-64=10.4.0=h69d5af5_11
- giflib=5.2.1=h7b6447c_0
- glib=2.74.1=h6239696_0
- glib-tools=2.74.1=h6239696_0
- glpk=5.0=h445213a_0
- gmp=6.2.1=h295c915_3
- graphite2=1.3.14=h295c915_1
- gsl=2.7.1=h6e86dc7_1
- gst-plugins-base=1.18.5=hf529b03_3
- gstreamer=1.18.5=ha1a6a79_0
- gstreamer-orc=0.4.33=h166bdaf_0
- gxx_impl_linux-64=10.4.0=h5231bdf_19
- gxx_linux-64=10.4.0=h6e491c6_11
- harfbuzz=4.2.0=h40b6f09_0
- hdf5=1.12.1=h70be1eb_2
- htslib=1.16=h6bc39ce_0
- humanfriendly=10.0=py310h06a4308_1
- icu=69.1=h9c3ff4c_0
- idna=3.4=pyhd8ed1ab_0
- ipykernel=6.19.2=py310h2f386ee_0
- ipython=8.7.0=py310h06a4308_0
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- jack=1.9.18=hfd4fe87_1001
- jedi=0.18.1=py310h06a4308_1
- jinja2=3.1.2=py310h06a4308_0
- jpeg=9e=h166bdaf_2
- jsonschema=4.16.0=py310h06a4308_0
- jupyter_client=7.4.8=py310h06a4308_0
- jupyter_core=5.1.1=py310h06a4308_0
- jupyter_server=1.23.4=py310h06a4308_0
- jupyterlab_pygments=0.1.2=py_0
- kallisto=0.48.0=h15996b6_2
- kernel-headers_linux-64=3.10.0=h57e8cba_10
- keyutils=1.6.1=h166bdaf_0
- kiwisolver=1.4.4=py310hbf28c38_1
- kmer-jellyfish=2.3.0=h9f5acd7_3
- krb5=1.19.3=h3790be6_0
- lame=3.100=h166bdaf_1003
- lcms2=2.12=h3be6417_0
- ld_impl_linux-64=2.39=hc81fddc_0
- lerc=4.0.0=h27087fc_0
- libarchive=3.5.2=h5de8990_0
- libblas=3.9.0=16_linux64_openblas
- libbrotlicommon=1.0.9=h166bdaf_8
- libbrotlidec=1.0.9=h166bdaf_8
- libbrotlienc=1.0.9=h166bdaf_8
- libcap=2.64=ha37c62d_0
- libcblas=3.9.0=16_linux64_openblas
- libclang=13.0.1=default_hc23dcda_0
- libclang13=14.0.6=default_h31cde19_0
- libcups=2.3.3=h3e49a29_2
- libcurl=7.86.0=h91b91d3_0
- libdb=6.2.32=h9c3ff4c_0
- libdeflate=1.13=h166bdaf_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libevent=2.1.10=h9b69904_4
- libffi=3.4.2=h7f98852_5
- libflac=1.3.4=h27087fc_0
- libgcc-devel_linux-64=10.4.0=hd38fd1e_19
- libgcc-ng=12.2.0=h65d4601_19
- libgcrypt=1.10.1=h166bdaf_0
- libgfortran-ng=12.2.0=h69a702a_19
- libgfortran5=12.2.0=h337968e_19
- libglib=2.74.1=h7a41b64_0
- libgomp=12.2.0=h65d4601_19
- libgpg-error=1.46=h620e276_0
- libiconv=1.17=h166bdaf_0
- libjemalloc=5.2.1=h9c3ff4c_6
- libjpeg-turbo=2.1.4=h166bdaf_0
- liblapack=3.9.0=16_linux64_openblas
- libllvm13=13.0.1=hf817b99_2
- libllvm14=14.0.6=h9e868ea_1
- libllvm15=15.0.3=h503ea73_0
- libmamba=1.1.0=h2c5f835_2
- libmambapy=1.1.0=py310h5976e0f_2
- libnghttp2=1.46.0=hce63b2e_0
- libnsl=2.0.0=h7f98852_0
- libogg=1.3.4=h7f98852_1
- libopenblas=0.3.21=pthreads_h78a6416_3
- libopus=1.3.1=h7f98852_1
- libpng=1.6.39=h753d276_0
- libpq=14.5=h72a31a5_3
- libsanitizer=10.4.0=h5246dfb_19
- libsndfile=1.0.31=h9c3ff4c_1
- libsodium=1.0.18=h7b6447c_0
- libsolv=0.7.23=h3eb15da_0
- libsqlite=3.40.0=h753d276_0
- libssh2=1.10.0=h8f2d780_0
- libstdcxx-devel_linux-64=10.4.0=hd38fd1e_19
- libstdcxx-ng=12.2.0=h46fd767_19
- libsystemd0=249=h424bc38_4
- libtiff=4.4.0=h0e0dad5_3
- libtool=2.4.7=h27087fc_0
- libudev1=252=h166bdaf_0
- libuuid=2.32.1=h7f98852_1000
- libvorbis=1.3.7=h9c3ff4c_0
- libwebp=1.2.4=h11a3e52_0
- libwebp-base=1.2.4=h166bdaf_0
- libxcb=1.13=h7f98852_1004
- libxkbcommon=1.0.3=he3ba5ed_0
- libxml2=2.9.14=haae042b_4
- libxslt=1.1.33=h0ef7038_3
- libzlib=1.2.13=h166bdaf_4
- llvm-openmp=8.0.1=hc9558a2_0
- lxml=4.8.0=py310h5764c6d_3
- lz4-c=1.9.3=h9c3ff4c_1
- lzo=2.10=h516909a_1000
- lzstring=1.0.4=py_1001
- make=4.2.1=h1bed415_1
- mamba=1.1.0=py310hf87f941_2
- markdown=3.4.1=py310h06a4308_0
- markupsafe=2.1.1=py310h7f8727e_0
- matplotlib=3.6.2=py310hff52083_0
- matplotlib-base=3.6.2=py310h8d5ebf3_0
- matplotlib-inline=0.1.6=py310h06a4308_0
- mistune=0.8.4=py310h7f8727e_1000
- mpg123=1.31.1=h27087fc_0
- multiqc=1.14=pyhdfd78af_0
- munkres=1.1.4=pyh9f0ad1d_0
- mysql-common=8.0.31=haf5c9bc_0
- mysql-libs=8.0.31=h28c427c_0
- nbclassic=0.4.8=py310h06a4308_0
- nbclient=0.5.13=py310h06a4308_0
- nbconvert=6.5.4=py310h06a4308_0
- nbformat=5.7.0=py310h06a4308_0
- ncurses=6.3=h27087fc_1
- nest-asyncio=1.5.6=py310h06a4308_0
- networkx=2.8.4=py310h06a4308_0
- notebook=6.5.2=py310h06a4308_0
- notebook-shim=0.2.2=py310h06a4308_0
- nspr=4.35=h27087fc_0
- nss=3.82=he02c5a1_0
- numpy=1.24.1=py310h08bbf29_0
- openjdk=11.0.13=h87a67e3_0
- openjpeg=2.4.0=h3ad879b_0
- openmp=8.0.1=0
- openssl=1.1.1s=h7f8727e_0
- packaging=22.0=pyhd8ed1ab_0
- pandoc=2.12=h06a4308_1
- pandocfilters=1.5.0=pyhd3eb1b0_0
- pango=1.50.7=hbd2fdc8_0
- parso=0.8.3=pyhd3eb1b0_0
- pcre2=10.37=he7ceb23_1
- perl=5.32.1=0_h5eee18b_perl5
- perl-b-cow=0.007=pl5321h166bdaf_0
- perl-base=2.23=pl5321hd8ed1ab_0
- perl-bioperl-core=1.7.8=pl5321hdfd78af_1
- perl-business-isbn=3.007=pl5321hd8ed1ab_0
- perl-business-isbn-data=20210112.006=pl5321hd8ed1ab_0
- perl-carp=1.50=pl5321hd8ed1ab_0
- perl-class-inspector=1.36=pl5321hdfd78af_0
- perl-class-load=0.25=pl5321hdfd78af_1
- perl-class-load-xs=0.10=pl5321h9f5acd7_6
- perl-class-methodmaker=2.24=pl5321hec16e2b_3
- perl-clone=0.46=pl5321h166bdaf_0
- perl-compress-raw-zlib=2.202=pl5321h166bdaf_0
- perl-constant=1.33=pl5321hd8ed1ab_0
- perl-cpan-meta-check=0.014=pl5321ha770c72_0
- perl-data-dumper=2.183=pl5321h166bdaf_0
- perl-data-optlist=0.113=pl5321ha770c72_0
- perl-db-file=1.855=pl5321h779adbc_1
- perl-db_file=1.858=pl5321h166bdaf_0
- perl-devel-globaldestruction=0.14=pl5321ha770c72_0
- perl-devel-overloadinfo=0.007=pl5321hdfd78af_0
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- tktable=2.10=h14c3975_0
- toml=0.10.2=pyhd8ed1ab_0
- toolz=0.12.0=pyhd8ed1ab_0
- tornado=6.2=py310h5764c6d_1
- tqdm=4.64.1=pyhd8ed1ab_0
- traitlets=5.7.1=py310h06a4308_0
- transdecoder=5.5.0=pl5321hdfd78af_5
- trimmomatic=0.39=hdfd78af_2
- trinity=2.13.2=hea94271_3
- typing-extensions=4.4.0=py310h06a4308_0
- typing_extensions=4.4.0=py310h06a4308_0
- tzdata=2022f=h191b570_0
- unicodedata2=15.0.0=py310h5764c6d_0
- urllib3=1.26.11=pyhd8ed1ab_0
- wcwidth=0.2.5=pyhd3eb1b0_0
- webencodings=0.5.1=py310h06a4308_1
- websocket-client=0.58.0=py310h06a4308_4
- wheel=0.38.4=pyhd8ed1ab_0
- xcb-util=0.4.0=h166bdaf_0
- xcb-util-image=0.4.0=h166bdaf_0
- xcb-util-keysyms=0.4.0=h166bdaf_0
- xcb-util-renderutil=0.3.9=h166bdaf_0
- xcb-util-wm=0.4.1=h166bdaf_0
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.2.1=h7f98852_2
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h27cfd23_1007
- xz=5.2.6=h166bdaf_0
- yaml=0.2.5=h7f98852_2
- yaml-cpp=0.7.0=h27087fc_2
- zeromq=4.3.4=h2531618_0
- zlib=1.2.13=h166bdaf_4
- zstd=1.5.2=h6239696_4
prefix: /home/tihana/mambaforge/envs/test