diff --git a/CHANGELOG.md b/CHANGELOG.md index a2aa5387..d1654375 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -13,6 +13,10 @@ * `falco`: Fix a typo in the `--reverse_complement` argument (PR #157). +## BUG FIXES + +* `cutadapt`: fix the the non-functional `action` parameter (PR #161). + ## MINOR CHANGES * Upgrade to Viash 0.9.0. diff --git a/src/cutadapt/script.sh b/src/cutadapt/script.sh index 20c92724..d181e2b0 100644 --- a/src/cutadapt/script.sh +++ b/src/cutadapt/script.sh @@ -108,7 +108,7 @@ input_args=$(echo \ ${par_overlap:+--overlap "${par_overlap}"} \ ${par_match_read_wildcards:+--match-read-wildcards} \ ${par_no_match_adapter_wildcards:+--no-match-adapter-wildcards} \ - ${par_action:+--action "${par_action}"} \ + ${par_action:+--action="${par_action}"} \ ${par_revcomp:+--revcomp} \ ) debug "Arguments to cutadapt:"