diff --git a/src/busco/test.sh b/src/busco/test.sh index bc18e39f..18f8d591 100644 --- a/src/busco/test.sh +++ b/src/busco/test.sh @@ -62,15 +62,15 @@ echo ">> Checking if output is empty" rm -r output/ cd .. -mkdir "run_geno_autolineage" -cd "run_geno_autolineage" +mkdir "run_genome" +cd "run_genome" -echo "> Running busco with auto lineage" +echo "> Running busco with genome data" "$meta_executable" \ - --input $test_dir/genome.fasta \ - --mode proteins \ - --auto_lineage \ + --input $test_dir/genome.fna \ + --mode genome \ + --lineage_dataseg saccharomycetes_odb10 \ --output_dir output echo ">> Checking output"