diff --git a/src/bcftools/bcftools_stats/help.txt b/src/bcftools/bcftools_stats/help.txt index ca29d5f4..e702e838 100644 --- a/src/bcftools/bcftools_stats/help.txt +++ b/src/bcftools/bcftools_stats/help.txt @@ -1,3 +1,6 @@ +``` +bcftools stats -h +``` About: Parses VCF or BCF and produces stats which can be plotted using plot-vcfstats. When two files are given, the program generates separate stats for intersection diff --git a/src/bcftools/bcftools_stats/script.sh b/src/bcftools/bcftools_stats/script.sh index 788046e5..a6504fa1 100644 --- a/src/bcftools/bcftools_stats/script.sh +++ b/src/bcftools/bcftools_stats/script.sh @@ -27,7 +27,7 @@ if [[ ${#input[@]} -gt 2 ]]; then exit 1 fi -# Execute bedtools bamtofastq with the provided arguments +# Execute bcftools stats with the provided arguments bcftools stats \ ${par_first_allele_only:+--1st-allele-only} \ ${par_split_by_ID:+--split-by-ID} \