diff --git a/.vscode/viash_config.yaml b/.vscode/viash_config.yaml index d416f28f..c28ee997 100644 --- a/.vscode/viash_config.yaml +++ b/.vscode/viash_config.yaml @@ -88,7 +88,7 @@ definitions: target: description: "Which target directory to use for `viash ns build`." type: "string" - reference: + references: description: "References to external resources related to the project." $ref: "#/definitions/ProjectConfigReferences" organization: diff --git a/src/arriba/config.vsh.yaml b/src/arriba/config.vsh.yaml index 1f9c78a9..cc73952f 100644 --- a/src/arriba/config.vsh.yaml +++ b/src/arriba/config.vsh.yaml @@ -7,7 +7,7 @@ functionality: homepage: https://arriba.readthedocs.io/en/latest/ documentation: https://arriba.readthedocs.io/en/latest/ repository: https://github.com/suhrig/arriba - reference: + references: doi: 10.1101/gr.257246.119 license: MIT requirements: diff --git a/src/bgzip/config.vsh.yaml b/src/bgzip/config.vsh.yaml index 843c3462..6c5a7742 100644 --- a/src/bgzip/config.vsh.yaml +++ b/src/bgzip/config.vsh.yaml @@ -6,7 +6,7 @@ functionality: homepage: https://www.htslib.org/ documentation: https://www.htslib.org/doc/bgzip.html repository: https://github.com/samtools/htslib - reference: + references: doi: 10.1093/gigascience/giab007 license: MIT requirements: diff --git a/src/busco/config.vsh.yaml b/src/busco/config.vsh.yaml index fdebb0f0..fb82070f 100644 --- a/src/busco/config.vsh.yaml +++ b/src/busco/config.vsh.yaml @@ -7,7 +7,7 @@ functionality: homepage: https://busco.ezlab.org/ documentation: https://busco.ezlab.org/busco_userguide.html repository: https://gitlab.com/ezlab/busco - reference: + references: doi: "10.1007/978-1-4939-9173-0_14" license: MIT argument_groups: diff --git a/src/fastp/config.vsh.yaml b/src/fastp/config.vsh.yaml index 3fe04869..344bb172 100644 --- a/src/fastp/config.vsh.yaml +++ b/src/fastp/config.vsh.yaml @@ -25,7 +25,7 @@ functionality: links: repository: https://github.com/OpenGene/fastp documentation: https://github.com/OpenGene/fastp/blob/master/README.md - reference: + references: doi: "10.1093/bioinformatics/bty560" license: MIT argument_groups: diff --git a/src/featurecounts/config.vsh.yaml b/src/featurecounts/config.vsh.yaml index 1a4af4f2..606af0e3 100644 --- a/src/featurecounts/config.vsh.yaml +++ b/src/featurecounts/config.vsh.yaml @@ -8,7 +8,7 @@ functionality: homepage: https://subread.sourceforge.net/ documentation: https://subread.sourceforge.net/SubreadUsersGuide.pdf repository: https://github.com/ShiLab-Bioinformatics/subread - reference: + references: doi: "10.1093/bioinformatics/btt656" license: GPL-3.0 requirements: