From 50540584ed45d6092964b1cb7bf43818ef583895 Mon Sep 17 00:00:00 2001 From: tgaspe Date: Mon, 26 Aug 2024 09:52:18 +0200 Subject: [PATCH] small changes --- src/bedtools/bedtools_bed12tobed6/config.vsh.yaml | 2 +- src/bedtools/bedtools_bed12tobed6/test.sh | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/src/bedtools/bedtools_bed12tobed6/config.vsh.yaml b/src/bedtools/bedtools_bed12tobed6/config.vsh.yaml index 7fea2039..8dd6328c 100644 --- a/src/bedtools/bedtools_bed12tobed6/config.vsh.yaml +++ b/src/bedtools/bedtools_bed12tobed6/config.vsh.yaml @@ -19,6 +19,7 @@ authors: roles: [ author, maintainer ] argument_groups: + - name: Inputs arguments: - name: --input @@ -64,4 +65,3 @@ engines: runners: - type: executable - type: nextflow - \ No newline at end of file diff --git a/src/bedtools/bedtools_bed12tobed6/test.sh b/src/bedtools/bedtools_bed12tobed6/test.sh index d3c74495..2ef596d9 100644 --- a/src/bedtools/bedtools_bed12tobed6/test.sh +++ b/src/bedtools/bedtools_bed12tobed6/test.sh @@ -41,7 +41,7 @@ chr21 10079666 10120808 uc002yiv.1 0 - chr21 10080031 10081687 uc002yiw.1 0 - chr21 10081660 10120796 uc002yix.2 0 - EOF -# Expected output bed6 file +# Expected output bed6 file with -n option cat < "$TMPDIR/expected_n.bed6" chr21 10079666 10120808 uc002yiv.1 1 - chr21 10080031 10081687 uc002yiw.1 1 -