From 0f7d03aeaf6f31c8c1b42673887bdfa322b913f5 Mon Sep 17 00:00:00 2001 From: dorien-er Date: Tue, 30 Jan 2024 20:52:51 +0100 Subject: [PATCH] remove unrequired params --- src/busco/busco/script.sh | 5 ----- 1 file changed, 5 deletions(-) diff --git a/src/busco/busco/script.sh b/src/busco/busco/script.sh index d754313e..5d97bb2a 100644 --- a/src/busco/busco/script.sh +++ b/src/busco/busco/script.sh @@ -44,16 +44,11 @@ busco \ ${par_metaeuk_parameters:+--metaeuk_parameters "$par_metaeuk_parameters"} \ ${par_metaeuk_rerun_parameters:+--metaeuk_rerun_parameters "$par_metaeuk_rerun_parameters"} \ ${par_miniprot:+--miniprot} \ - ${par_offline:+--offline} \ ${par_opt_out_run_stats:+--opt-out-run-stats} \ ${par_quiet:+--quiet} \ ${par_restart:+--restart} \ ${par_scaffold_composition:+--scaffold_composition} \ ${par_tar:+--tar} \ - ${par_download_base_url:+--download_base_url "$par_download_base_url"} \ - ${par_download_path:+--download_path "$par_download_path"} \ - ${par_download:+--download "$par_download"} - out_dir=$(find "$tmp_dir/$prefix" -maxdepth 1 -name 'run_*')