From 58a316649e79b5003b4ecbb28534f4ed9342207f Mon Sep 17 00:00:00 2001 From: Olivier Fedrigo Date: Wed, 20 Oct 2021 17:00:20 -0400 Subject: [PATCH] Delete table_tracker.yml --- _data/table_tracker.yml | 8775 --------------------------------------- 1 file changed, 8775 deletions(-) delete mode 100644 _data/table_tracker.yml diff --git a/_data/table_tracker.yml b/_data/table_tracker.yml deleted file mode 100644 index 1b6b201..0000000 --- a/_data/table_tracker.yml +++ /dev/null @@ -1,8775 +0,0 @@ -info: Oct 20 2021 16:46:17 -toc: -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_900634415.1 - class: Actinopterygii,Bony fishes - common_name: channel bull blenny - family: Bovichtidae - hub: others - order: Perciformes - scientific_name: Cottoperca gobio - status: 8-NCBI - taxon_id: '56716' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cottoperca_gobio/fCotGob3/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cottoperca_gobio/fCotGob3/genomic_data/bionano/ - HiC: - link: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cottoperca_gobio/fCotGob2/genomic_data/arima/ - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cottoperca_gobio/fCotGob3/genomic_data/pacbio/ - trio: '' - vglId: fCotGob3 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_907165065.1 - class: Aves,birds - common_name: Eurasian nightjar - family: Caprimulgidae - hub: others - order: Caprimulgiformes - scientific_name: Caprimulgus europaeus - status: 8-NCBI - taxon_id: '111811' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Caprimulgus_europaeus/bCapEur3/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Caprimulgus_europaeus/bCapEur3/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Caprimulgus_europaeus/bCapEur3/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Caprimulgus_europaeus/bCapEur3/genomic_data/pacbio/ - trio: '' - vglId: bCapEur3 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_013368605.1 - class: Aves,birds - common_name: great potoo - family: Nyctibiidae - hub: vgl - order: Caprimulgiformes - scientific_name: Nyctibius grandis - status: 8-NCBI - taxon_id: '48427' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Nyctibius_grandis/bNycGra1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Nyctibius_grandis/bNycGra1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Nyctibius_grandis/bNycGra1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Nyctibius_grandis/bNycGra1/genomic_data/pacbio/ - trio: '' - vglId: bNycGra1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: Brown-headed cowbird - family: Icteridae - hub: vgl - order: Passeriformes - scientific_name: Molothrus ater - status: 0-data_queued - taxon_id: '84834' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bMolAte1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_900700375.2 - class: Actinopterygii,Bony fishes - common_name: denticle herring - family: Denticipitidae - hub: vgl - order: Clupeiformes - scientific_name: Denticeps clupeoides - status: 8-NCBI - taxon_id: '299321' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Denticeps_clupeoides/fDenClu1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Denticeps_clupeoides/fDenClu1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Denticeps_clupeoides/fDenClu1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Denticeps_clupeoides/fDenClu1/genomic_data/pacbio/ - trio: '' - vglId: fDenClu1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Discoglossus_pictus/aDisPic1/assembly_vgp_standard_1.6/ - class: Amphibia,amphibians - common_name: painted frog - family: Alytidae - hub: others - order: Anura - scientific_name: Discoglossus pictus - status: 5-asm_done - taxon_id: '8351' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Discoglossus_pictus/aDisPic1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Discoglossus_pictus/aDisPic1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Discoglossus_pictus/aDisPic1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Discoglossus_pictus/aDisPic1/genomic_data/pacbio/ - trio: '' - vglId: aDisPic1 - vgp_phase: phase1 -- asm: '#' - class: ',arthropods' - common_name: snow crab - family: Majidae - hub: vgl - order: Decapoda - scientific_name: Chionoecetes opilio - status: 2-data_progress - taxon_id: '41210' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 3 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - vglId: qChiOpi2 - vgp_phase: phase2 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gopherus_flavomarginatus/rGopFla2/assembly_nhgri_trio_1.6/ - class: Reptilia,reptiles - common_name: Mexican gopher tortoise - family: Testudinidae - hub: vgl - order: Testudines - scientific_name: Gopherus flavomarginatus - status: 6-asm_curation - taxon_id: '286002' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gopherus_flavomarginatus/rGopFla2/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gopherus_flavomarginatus/rGopFla2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gopherus_flavomarginatus/rGopFla2/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gopherus_flavomarginatus/rGopFla2/genomic_data/pacbio/ - trio: rGopFla1/rGopFla3 - vglId: rGopFla2 - vgp_phase: phase4 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_015237465.2 - class: Reptilia,reptiles - common_name: Green sea turtle - family: Cheloniidae - hub: others - order: Testudines - scientific_name: Chelonia mydas - status: 8-NCBI - taxon_id: '8469' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chelonia_mydas/rCheMyd1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chelonia_mydas/rCheMyd1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chelonia_mydas/rCheMyd1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chelonia_mydas/rCheMyd1/genomic_data/pacbio/ - trio: '' - vglId: rCheMyd1 - vgp_phase: phase1 -- asm: '#' - class: Chondrichthyes,cartilaginous fishes - common_name: sharpnose sevengill shark - family: Hexanchidae - hub: vgl - order: Hexanchiformes - scientific_name: Heptranchias perlo - status: 2-data_progress - taxon_id: '212740' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: sHepPer1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_cherrug/bFalChe1/assembly_vgp_standard_2.0/ - class: Aves,birds - common_name: Saker falcon - family: Falconidae - hub: vgl - order: Falconiformes - scientific_name: Falco cherrug - status: 6-asm_curation - taxon_id: '345164' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_cherrug/bFalChe1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_cherrug/bFalChe1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_cherrug/bFalChe1/genomic_data/pacbio/ - trio: '' - vglId: bFalChe1 - vgp_phase: phase4 -- asm: '#' - class: Amphibia,amphibians - common_name: rocket frog - family: Dendrobatidae - hub: vgl - order: Anura - scientific_name: Anomaloglossus baeobatrachus - status: 2-data_progress - taxon_id: '238106' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: aAnoBae1 - vgp_phase: phase2 -- asm: '#' - class: Chondrichthyes,cartilaginous fishes - common_name: zebra shark - family: Stegostomatidae - hub: vgl - order: Orectolobiformes - scientific_name: Stegostoma tigrinum - status: 0-data_queued - taxon_id: '000000' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: sSteTig2 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_910594005.1 - class: Mammalia,mammals - common_name: red deer - family: Cervidae - hub: others - order: Artiodactyla - scientific_name: Cervus elaphus - status: 8-NCBI - taxon_id: '9860' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cervus_elaphus/mCerEla1/genomic_data/10x/ - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cervus_elaphus/mCerEla1/genomic_data/arima/ - Ilm: - status: 1 - url: '#' - ONT: - status: 1 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cervus_elaphus/mCerEla1/genomic_data/pacbio/ - trio: '' - vglId: mCerEla1 - vgp_phase: phase2 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_peregrinus/bFalPer1/assembly_vgp_standard_2.0/ - class: Aves,birds - common_name: peregrine falcon - family: Falconidae - hub: vgl - order: Falconiformes - scientific_name: Falco peregrinus - status: 6-asm_curation - taxon_id: '8954' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_peregrinus/bFalPer1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_peregrinus/bFalPer1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_peregrinus/bFalPer1/genomic_data/pacbio/ - trio: '' - vglId: bFalPer1 - vgp_phase: phase4 -- asm: '#' - class: Aves,birds - common_name: black-legged kittiwake - family: Laridae - hub: vgl - order: Charadriiformes - scientific_name: Rissa tridactyla - status: 3-data_progress - taxon_id: '75485' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rissa_tridactyla/bRisTri1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rissa_tridactyla/bRisTri1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: bRisTri1 - vgp_phase: phase2 -- asm: '#' - class: Aves,birds - common_name: Micronesian kingfisher - family: Alcedinidae - hub: vgl - order: Coraciiformes - scientific_name: Todiramphus cinnamominus - status: 3-data_progress - taxon_id: '1006542' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Todiramphus_cinnamominus/bTodCin1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: bTodCin1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_014108255.1 - class: Mammalia,mammals - common_name: greater horseshoe bat - family: Rhinolophidae - hub: vgl - order: Chiroptera - scientific_name: Rhinolophus ferrumequinum - status: 8-NCBI - taxon_id: '59479' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinolophus_ferrumequinum/mRhiFer1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinolophus_ferrumequinum/mRhiFer1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinolophus_ferrumequinum/mRhiFer1/genomic_data/phase/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinolophus_ferrumequinum/mRhiFer1/genomic_data/pacbio/ - trio: '' - vglId: mRhiFer1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scatophagus_argus/fScaArg1/assembly_curated/ - class: Enteropneusta,Bony fishes - common_name: spotted scat - family: Scatophagidae - hub: others - order: '' - scientific_name: Scatophagus argus - status: 7-asm_curated - taxon_id: '75038' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scatophagus_argus/fScaArg1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scatophagus_argus/fScaArg1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scatophagus_argus/fScaArg1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scatophagus_argus/fScaArg1/genomic_data/pacbio/ - trio: '' - vglId: fScaArg1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_902167405.1 - class: Actinopterygii,Bony fishes - common_name: Atlantic cod - family: Gadidae - hub: others - order: Gadiformes - scientific_name: Gadus morhua - status: 7-NCBI - taxon_id: '8049' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - trio: '' - vglId: fGadMor1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_018492685.1 - class: Actinopterygii,Bony fishes - common_name: American shad - family: Clupeidae - hub: vgl - order: Clupeiformes - scientific_name: Alosa sapidissima - status: 8-NCBI - taxon_id: '34773' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Alosa_sapidissima/fAloSap1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Alosa_sapidissima/fAloSap1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Alosa_sapidissima/fAloSap1/genomic_data/pacbio/ - trio: '' - vglId: fAloSap1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_004027225.2 - class: Aves,birds - common_name: Kakapo - family: Psittacidae - hub: others - order: Psittaciformes - scientific_name: Strigops habroptilus - status: 8-NCBI - taxon_id: '57251' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Strigops_habroptilus/bStrHab1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Strigops_habroptilus/bStrHab1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Strigops_habroptilus/bStrHab1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Strigops_habroptilus/bStrHab1/genomic_data/pacbio/ - trio: '' - vglId: bStrHab1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_901000725.3 - class: Actinopterygii,Bony fishes - common_name: torafugu - family: Tetraodontidae - hub: vgl - order: Tetraodontiformes - scientific_name: Takifugu rubripes - status: 8-NCBI - taxon_id: '31033' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Takifugu_rubripes/fTakRub1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Takifugu_rubripes/fTakRub1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Takifugu_rubripes/fTakRub1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Takifugu_rubripes/fTakRub1/genomic_data/pacbio/ - trio: '' - vglId: fTakRub1 - vgp_phase: phase1 -- asm: '#' - class: Reptilia,reptiles - common_name: royal ground snake - family: Dipsadidae - hub: vgl - order: Squamata - scientific_name: Erythrolamprus reginae - status: 3-data_progress - taxon_id: '121349' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erythrolamprus_reginae/rEryReg1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: rEryReg1 - vgp_phase: phase2 -- asm: '#' - class: Mammalia,mammals - common_name: tammar wallaby - family: Macropodidae - hub: vgl - order: Diprotodontia - scientific_name: Macropus eugenii - status: 3-data_progress - taxon_id: '9315' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Macropus_eugenii/mMacEug1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Macropus_eugenii/mMacEug1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Macropus_eugenii/mMacEug1/genomic_data/pacbio/ - trio: '' - vglId: mMacEug1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_007364275.1 - class: Actinopterygii,Bony fishes - common_name: flier cichlid - family: Cichlidae - hub: vgl - order: Cichliformes - scientific_name: Archocentrus centrarchus - status: 8-NCBI - taxon_id: '63155' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Archocentrus_centrarchus/fArcCen1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Archocentrus_centrarchus/fArcCen1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Archocentrus_centrarchus/fArcCen1/genomic_data/phase/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Archocentrus_centrarchus/fArcCen1/genomic_data/pacbio/ - trio: '' - vglId: fArcCen1 - vgp_phase: phase1 -- asm: '#' - class: Chondrichthyes,cartilaginous fishes - common_name: Yucatan manta ray - family: Mobulidae - hub: vgl - order: Myliobatiformes - scientific_name: Manta giorna - status: 2-data_progress - taxon_id: '000000' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - vglId: sManGio1 - vgp_phase: phase2 -- asm: '#' - class: Aves,birds - common_name: Humboldt's penguin - family: Spheniscidae - hub: vgl - order: Sphenisciformes - scientific_name: Spheniscus humboldti - status: 3-data_progress - taxon_id: '9240' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Spheniscus_humboldti/bSphHub1/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: bSphHub1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: Swift parrot - family: Psittacidae - hub: vgl - order: Psittaciformes - scientific_name: Lathamus discolor - status: 2-data_progress - taxon_id: '678569' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bLatDis1 - vgp_phase: phase3 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: pejerrey - family: Atherinopsidae - hub: vgl - order: Atheriniformes - scientific_name: Odontesthes bonariensis - status: 0-data_queued - taxon_id: '219752' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: fOdoBon1 - vgp_phase: phase2 -- asm: '#' - class: Mammalia,mammals - common_name: chimpanzee - family: Hominidae - hub: vgl - order: Primates - scientific_name: Pan troglodytes - status: 0-data_queued - taxon_id: '9598' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: mPanTro2 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_905171665.1 - class: Actinopterygii,Bony fishes - common_name: Atlantic horse mackerel - family: Carangidae - hub: others - order: Carangiformes - scientific_name: Trachurus trachurus - status: 8-NCBI - taxon_id: '36212' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trachurus_trachurus/fTraTra1/genomic_data/10x/ - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trachurus_trachurus/fTraTra1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trachurus_trachurus/fTraTra1/genomic_data/pacbio/ - trio: '' - vglId: fTraTra1 - vgp_phase: phase2 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Heterohyrax_brucei/mHetBru1/assembly_vgp_standard_2.1/ - class: Mammalia,mammals - common_name: yellow-spotted hyrax - family: Procaviidae - hub: others - order: Hyracoidea - scientific_name: Heterohyrax brucei - status: 5-asm_done - taxon_id: '77598' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Heterohyrax_brucei/mHetBru1/genomic_data/bionano/ - HiC: - status: 4 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Heterohyrax_brucei/mHetBru1/genomic_data/pacbio/ - trio: '' - vglId: mHetBru1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_017639655.2 - class: Aves,birds - common_name: lesser kestrel - family: Falconidae - hub: vgl - order: Falconiformes - scientific_name: Falco naumanni - status: 8-NCBI - taxon_id: '148594' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_naumanni/bFalNau1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_naumanni/bFalNau1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_naumanni/bFalNau1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_naumanni/bFalNau1/genomic_data/pacbio/ - trio: bFalNau2/bFalNau3 - vglId: bFalNau1 - vgp_phase: phase4 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009829155.1 - class: Mammalia,mammals - common_name: ermine - family: Mustelidae - hub: vgl - order: Carnivora - scientific_name: Mustela erminea - status: 8-NCBI - taxon_id: '36723' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mustela_erminea/mMusErm1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mustela_erminea/mMusErm1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mustela_erminea/mMusErm1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mustela_erminea/mMusErm1/genomic_data/pacbio/ - trio: '' - vglId: mMusErm1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_004126475.2 - class: Mammalia,mammals - common_name: pale spear-nosed bat - family: Phyllostomidae - hub: vgl - order: Chiroptera - scientific_name: Phyllostomus discolor - status: 8-NCBI - taxon_id: '89673' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Phyllostomus_discolor/mPhyDis1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Phyllostomus_discolor/mPhyDis1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Phyllostomus_discolor/mPhyDis1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Phyllostomus_discolor/mPhyDis1/genomic_data/pacbio/ - trio: '' - vglId: mPhyDis1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: American goldfinch - family: Fringillidae - hub: vgl - order: Passeriformes - scientific_name: Spinus tristis - status: 1-DNA_isolation - taxon_id: '54773' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bSpiTri1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_011004845.1 - class: Actinopterygii,Bony fishes - common_name: northern pike - family: Esocidae - hub: others - order: Esociformes - scientific_name: Esox lucius - status: 8-NCBI - taxon_id: '8010' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Esox_lucius/fEsoLuc1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Esox_lucius/fEsoLuc1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Esox_lucius/fEsoLuc1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Esox_lucius/fEsoLuc1/genomic_data/pacbio/ - trio: '' - vglId: fEsoLuc1 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: pig-tailed macaque - family: Cercopithecidae - hub: vgl - order: Primates - scientific_name: Macaca nemestrina - status: 0-data_queued - taxon_id: '9545' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: mMacNem1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_902655055.2 - class: Mammalia,mammals - common_name: Eurasian river otter - family: Mustelidae - hub: others - order: Carnivora - scientific_name: Lutra lutra - status: 8-NCBI - taxon_id: '9657' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lutra_lutra/mLutLut1/genomic_data/10x/ - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lutra_lutra/mLutLut1/genomic_data/baylor-hic/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lutra_lutra/mLutLut1/genomic_data/pacbio/ - trio: '' - vglId: mLutLut1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: Kauai elepaio - family: Monarchidae - hub: vgl - order: Passeriformes - scientific_name: Chasiempis sclateri - status: 3-data_progress - taxon_id: '1576535' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chasiempis_sclateri/bChaScl1/genomic_data/bionano/ - HiC: - status: 3 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: bChaScl1 - vgp_phase: phase2 -- asm: '#' - class: Aves,birds - common_name: song sparrow - family: Passerellidae - hub: vgl - order: Passeriformes - scientific_name: Melospiza melodia - status: 3-data_progress - taxon_id: '44397' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melospiza_melodia/bMelMel1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: bMelMel1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_902713425.1 - class: Actinopterygii,Bony fishes - common_name: sterlet - family: Acipenseridae - hub: others - order: Acipenseriformes - scientific_name: Acipenser ruthenus - status: 8-NCBI - taxon_id: '7906' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acipenser_ruthenus/fAciRut3/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acipenser_ruthenus/fAciRut3/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acipenser_ruthenus/fAciRut3/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acipenser_ruthenus/fAciRut3/genomic_data/pacbio/ - trio: fAciRut1/fAciRut2 - vglId: fAciRut3 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: speckled mousebird - family: Coliidae - hub: vgl - order: Coliiformes - scientific_name: Colius striatus - status: 3-data_progress - taxon_id: '57412' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Colius_striatus/bColStr4/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: bColStr4 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Jaculus_jaculus/mJacJac1/assembly_curated/ - class: Mammalia,mammals - common_name: lesser Egyptian jerboa - family: Dipodidae - hub: others - order: Rodentia - scientific_name: Jaculus jaculus - status: 7-asm_curated - taxon_id: '51337' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Jaculus_jaculus/mJacJac1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Jaculus_jaculus/mJacJac1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Jaculus_jaculus/mJacJac1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Jaculus_jaculus/mJacJac1/genomic_data/pacbio/ - trio: mJacJac2/mJacJac3 - vglId: mJacJac1 - vgp_phase: phase1 -- asm: '#' - class: Reptilia,reptiles - common_name: snub-nosed viper - family: Viperidae - hub: vgl - order: Squamata - scientific_name: Vipera latastei - status: 3-data_progress - taxon_id: '246179' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Vipera_latastei/rVipLat1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Vipera_latastei/rVipLat1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Vipera_latastei/rVipLat1/genomic_data/pacbio/ - trio: '' - vglId: rVipLat1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009819825.1 - class: Aves,birds - common_name: Red-legged seriema - family: Cariamidae - hub: vgl - order: Cariamiformes - scientific_name: Cariama cristata - status: 8-NCBI - taxon_id: '54380' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cariama_cristata/bCarCri1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cariama_cristata/bCarCri1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cariama_cristata/bCarCri1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cariama_cristata/bCarCri1/genomic_data/pacbio/ - trio: '' - vglId: bCarCri1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_017639675.1 - class: Actinopterygii,Bony fishes - common_name: '' - family: Galaxiidae - hub: others - order: Galaxiiformes - scientific_name: Aplochiton taeniatus - status: 8-NCBI - taxon_id: '946358' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aplochiton_taeniatus/fAplTae1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aplochiton_taeniatus/fAplTae1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aplochiton_taeniatus/fAplTae1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aplochiton_taeniatus/fAplTae1/genomic_data/pacbio/ - trio: '' - vglId: fAplTae1 - vgp_phase: phase1 -- asm: '#' - class: Chondrichthyes,cartilaginous fishes - common_name: horn shark - family: Heterodontidae - hub: vgl - order: Heterodontiformes - scientific_name: Heterodontus francisci - status: 2-data_progress - taxon_id: '7792' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: sHetFra1 - vgp_phase: phase1 -- asm: '#' - class: Reptilia,reptiles - common_name: Gharial - family: Gavialidae - hub: vgl - order: Crocodylia - scientific_name: Gavialis gangeticus - status: 2-data_progress - taxon_id: '94835' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: rGavGan2 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_905171765.1 - class: Amphibia,amphibians - common_name: common toad - family: Bufonidae - hub: others - order: Anura - scientific_name: Bufo bufo - status: 8-NCBI - taxon_id: '8384' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bufo_bufo/aBufBuf1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bufo_bufo/aBufBuf1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bufo_bufo/aBufBuf1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bufo_bufo/aBufBuf1/genomic_data/pacbio/ - trio: '' - vglId: aBufBuf1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_011004875.1 - class: Aves,birds - common_name: grey crowned-crane - family: Gruidae - hub: vgl - order: Gruiformes - scientific_name: Balearica regulorum - status: 8-NCBI - taxon_id: '925459' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Balearica_regulorum/bBalReg1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Balearica_regulorum/bBalReg1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Balearica_regulorum/bBalReg1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Balearica_regulorum/bBalReg1/genomic_data/pacbio/ - trio: '' - vglId: bBalReg1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_017976375.1 - class: Aves,birds - common_name: common cuckoo - family: Cuculidae - hub: vgl - order: Cuculiformes - scientific_name: Cuculus canorus - status: 8-NCBI - taxon_id: '55661' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cuculus_canorus/bCucCan1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cuculus_canorus/bCucCan1/genomic_data/bionano/ - HiC: - link: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cuculus_canorus/bCucCan2/genomic_data/arima/ - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cuculus_canorus/bCucCan1/genomic_data/pacbio/ - trio: '' - vglId: bCucCan1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009769535.1 - class: Reptilia,reptiles - common_name: Western terrestrial garter snake - family: Colubridae - hub: vgl - order: Squamata - scientific_name: Thamnophis elegans - status: 8-NCBI - taxon_id: '35005' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thamnophis_elegans/rThaEle1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thamnophis_elegans/rThaEle1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thamnophis_elegans/rThaEle1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thamnophis_elegans/rThaEle1/genomic_data/pacbio/ - trio: '' - vglId: rThaEle1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_013347855.1 - class: Actinopteri,Bony fishes - common_name: European eel - family: Anguillidae - hub: others - order: Anguilliformes - scientific_name: Anguilla anguilla - status: 8-NCBI - taxon_id: '7936' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anguilla_anguilla/fAngAng1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anguilla_anguilla/fAngAng1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anguilla_anguilla/fAngAng1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anguilla_anguilla/fAngAng1/genomic_data/pacbio/ - trio: '' - vglId: fAngAng1 - vgp_phase: phase1 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: delta smelt - family: Osmeridae - hub: vgl - order: Osmeriformes - scientific_name: Hypomesus transpacificus - status: 3-data_progress - taxon_id: '137520' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hypomesus_transpacificus/fHypTra1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hypomesus_transpacificus/fHypTra1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - trio: '' - vglId: fHypTra1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: song sparrow - family: Passerellidae - hub: vgl - order: Passeriformes - scientific_name: Melospiza georgiana - status: 3-data_progress - taxon_id: '44398' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melospiza_georgiana/bMelGeo1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melospiza_georgiana/bMelGeo1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: bMelGeo1 - vgp_phase: phase4 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009819655.1 - class: Aves,birds - common_name: blackcap - family: Sylviidae - hub: vgl - order: Passeriformes - scientific_name: Sylvia atricapilla - status: 8-NCBI - taxon_id: '48155' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sylvia_atricapilla/bSylAtr1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sylvia_atricapilla/bSylAtr1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sylvia_atricapilla/bSylAtr1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sylvia_atricapilla/bSylAtr1/genomic_data/pacbio/ - trio: '' - vglId: bSylAtr1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_900324465.3 - class: Actinopterygii,Bony fishes - common_name: climbing perch - family: Anabantidae - hub: vgl - order: Anabantiformes - scientific_name: Anabas testudineus - status: 8-NCBI - taxon_id: '64144' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anabas_testudineus/fAnaTes1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anabas_testudineus/fAnaTes1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anabas_testudineus/fAnaTes1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anabas_testudineus/fAnaTes1/genomic_data/pacbio/ - trio: '' - vglId: fAnaTes1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_900324485.3 - class: Actinopterygii,Bony fishes - common_name: zig-zag eel - family: Mastacembelidae - hub: vgl - order: Synbranchiformes - scientific_name: Mastacembelus armatus - status: 8-NCBI - taxon_id: '205130' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mastacembelus_armatus/fMasArm1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mastacembelus_armatus/fMasArm1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mastacembelus_armatus/fMasArm1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mastacembelus_armatus/fMasArm1/genomic_data/pacbio/ - trio: '' - vglId: fMasArm1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_017976425.1 - class: Enteropneusta,Bony fishes - common_name: banded archerfish - family: Toxotidae - hub: others - order: '' - scientific_name: Toxotes jaculatrix - status: 8-NCBI - taxon_id: '941984' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Toxotes_jaculatrix/fToxJac2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Toxotes_jaculatrix/fToxJac2/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Toxotes_jaculatrix/fToxJac2/genomic_data/pacbio/ - trio: '' - vglId: fToxJac2 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: Eastern phoebe - family: Tyrannidae - hub: vgl - order: Passeriformes - scientific_name: Sayornis phoebe - status: 0-data_queued - taxon_id: '56315' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bSayPho1 - vgp_phase: phase2 -- asm: '#' - class: Mammalia,mammals - common_name: Bolivian squirrel monkey - family: Cebidae - hub: vgl - order: Primates - scientific_name: Saimiri boliviensis - status: 2-data_progress - taxon_id: '27679' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: mSaiBol1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: Common canary - family: Fringillidae - hub: vgl - order: Passeriformes - scientific_name: Serinus canaria - status: 0-data_queued - taxon_id: '9135' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bSerCaa1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: tufted titmouse - family: Paridae - hub: vgl - order: Passeriformes - scientific_name: Baeolophus bicolor - status: 1-DNA_isolation - taxon_id: '88114' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bBaeBic1 - vgp_phase: phase2 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Diceros_bicornis/mDicBic1/assembly_curated/ - class: Mammalia,mammals - common_name: black rhinoceros - family: Rhinocerotidae - hub: vgl - order: Perissodactyla - scientific_name: Diceros bicornis - status: 7-asm_curated - taxon_id: '9805' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Diceros_bicornis/mDicBic1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Diceros_bicornis/mDicBic1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Diceros_bicornis/mDicBic1/genomic_data/pacbio/ - trio: mDicBic2/mDicBic3 - vglId: mDicBic1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_014839755.1 - class: Aves,birds - common_name: garden warbler - family: Sylviidae - hub: vgl - order: Passeriformes - scientific_name: Sylvia borin - status: 8-NCBI - taxon_id: '73324' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sylvia_borin/bSylBor1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sylvia_borin/bSylBor1/genomic_data/bionano/ - HiC: - link: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sylvia_borin/bSylBor2/genomic_data/arima/ - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sylvia_borin/bSylBor1/genomic_data/pacbio/ - trio: '' - vglId: bSylBor1 - vgp_phase: phase4 -- asm: '#' - class: Reptilia,reptiles - common_name: olive python - family: Pythonidae - hub: vgl - order: Squamata - scientific_name: Liasis olivaceus - status: 3-data_progress - taxon_id: '283338' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Liasis_olivaceus/rLiaOli1/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: rLiaOli1 - vgp_phase: phase2 -- asm: '#' - class: Aves,birds - common_name: great crested grebe - family: Podicipedidae - hub: vgl - order: Podicipediformes - scientific_name: Podiceps cristatus - status: 2-data_progress - taxon_id: '345573' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bPodCri1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_014176215.1 - class: Mammalia,mammals - common_name: Egyptian rousette - family: Pteropodidae - hub: vgl - order: Chiroptera - scientific_name: Rousettus aegyptiacus - status: 8-NCBI - taxon_id: '9407' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rousettus_aegyptiacus/mRouAeg1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rousettus_aegyptiacus/mRouAeg1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rousettus_aegyptiacus/mRouAeg1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rousettus_aegyptiacus/mRouAeg1/genomic_data/pacbio/ - trio: '' - vglId: mRouAeg1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009819705.1 - class: Actinopterygii,Bony fishes - common_name: Atlantic halibut - family: Pleuronectidae - hub: vgl - order: Pleuronectiformes - scientific_name: Hippoglossus hippoglossus - status: 8-NCBI - taxon_id: '8267' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hippoglossus_hippoglossus/fHipHip1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hippoglossus_hippoglossus/fHipHip1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hippoglossus_hippoglossus/fHipHip1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hippoglossus_hippoglossus/fHipHip1/genomic_data/pacbio/ - trio: '' - vglId: fHipHip1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_902148855.1 - class: Actinopterygii,Bony fishes - common_name: orbiculate cardinalfish - family: Apogonidae - hub: others - order: Kurtiformes - scientific_name: Sphaeramia orbicularis - status: 8-NCBI - taxon_id: '375764' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sphaeramia_orbicularis/fSphaOr1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sphaeramia_orbicularis/fSphaOr1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sphaeramia_orbicularis/fSphaOr1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sphaeramia_orbicularis/fSphaOr1/genomic_data/pacbio/ - trio: '' - vglId: fSphaOr1 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: European shrew - family: Soricidae - hub: vgl - order: Eulipotyphla - scientific_name: Sorex araneus - status: 3-data_progress - taxon_id: '42254' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sorex_araneus/mSorAra1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sorex_araneus/mSorAra1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sorex_araneus/mSorAra1/genomic_data/pacbio/ - trio: '' - vglId: mSorAra1 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tautogolabrus_adspersus/fTauAds1/assembly_curated/ - class: Actinopterygii,Bony fishes - common_name: cunner - family: Labridae - hub: vgl - order: Perciformes - scientific_name: Tautogolabrus adspersus - status: 7-asm_curated - taxon_id: '34787' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tautogolabrus_adspersus/fTauAds1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tautogolabrus_adspersus/fTauAds1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tautogolabrus_adspersus/fTauAds1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tautogolabrus_adspersus/fTauAds1/genomic_data/pacbio/ - trio: '' - vglId: fTauAds1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_900964775.1 - class: Actinopterygii,Bony fishes - common_name: Asian bonytongue - family: Osteoglossidae - hub: others - order: Osteoglossiformes - scientific_name: Scleropages formosus - status: 8-NCBI - taxon_id: '113540' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scleropages_formosus/fSclFor1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scleropages_formosus/fSclFor1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scleropages_formosus/fSclFor1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scleropages_formosus/fSclFor1/genomic_data/pacbio/ - trio: '' - vglId: fSclFor1 - vgp_phase: phase1 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: midwater eelpout - family: Zoarcidae - hub: vgl - order: Perciformes - scientific_name: Melanostigma pammelas - status: 2-data_progress - taxon_id: '557412' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: fMelPam1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_903797595.2 - class: Aves,birds - common_name: European robin - family: Turdidae - hub: others - order: Passeriformes - scientific_name: Erithacus rubecula - status: 8-NCBI - taxon_id: '37610' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erithacus_rubecula/bEriRub2/genomic_data/10x/ - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erithacus_rubecula/bEriRub2/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erithacus_rubecula/bEriRub2/genomic_data/pacbio/ - trio: '' - vglId: bEriRub2 - vgp_phase: phase2 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: trahira - family: Erythrinidae - hub: vgl - order: Characiformes - scientific_name: Hoplias malabaricus - status: 2-data_progress - taxon_id: '27720' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: fHopMal1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_900634775.2 - class: Actinopterygii,Bony fishes - common_name: blunt-snouted clingfish - family: Gobiesocidae - hub: others - order: Blenniiformes - scientific_name: Gouania willdenowi - status: 8-NCBI - taxon_id: '441366' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gouania_willdenowi/fGouWil2/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gouania_willdenowi/fGouWil2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gouania_willdenowi/fGouWil2/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gouania_willdenowi/fGouWil2/genomic_data/pacbio/ - trio: '' - vglId: fGouWil2 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: nine-banded armadillo - family: Dasypodidae - hub: vgl - order: Cingulata - scientific_name: Dasypus novemcinctus - status: 3-data_progress - taxon_id: '9361' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dasypus_novemcinctus/mDasNov1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dasypus_novemcinctus/mDasNov1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: mDasNov1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_901765095.2 - class: Amphibia,amphibians - common_name: tiny Cayenne caecilian - family: Siphonopidae - hub: others - order: Gymnophiona - scientific_name: Microcaecilia unicolor - status: 8-NCBI - taxon_id: '1415580' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Microcaecilia_unicolor/aMicUni1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Microcaecilia_unicolor/aMicUni1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Microcaecilia_unicolor/aMicUni1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Microcaecilia_unicolor/aMicUni1/genomic_data/pacbio/ - trio: '' - vglId: aMicUni1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bombina_bombina/aBomBom1/assembly_vgp_standard_1.6/ - class: Amphibia,amphibians - common_name: fire-bellied toad - family: Bombinatoridae - hub: others - order: Anura - scientific_name: Bombina bombina - status: 5-asm_done - taxon_id: '8345' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bombina_bombina/aBomBom1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bombina_bombina/aBomBom1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bombina_bombina/aBomBom1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bombina_bombina/aBomBom1/genomic_data/pacbio/ - trio: '' - vglId: aBomBom1 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: Clouded leopard - family: Felidae - hub: vgl - order: Carnivora - scientific_name: Neofelis nebulosa - status: 3-data_progress - taxon_id: '61452' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Neofelis_nebulosa/mNeoNeb1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Neofelis_nebulosa/mNeoNeb1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: mNeoNeb1 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pangasianodon_hypophthalmus/fPanHyp1/assembly_vgp_standard_2.1/ - class: Actinopterygii,Bony fishes - common_name: striped catfish - family: Pangasiidae - hub: others - order: Siluriformes - scientific_name: Pangasianodon hypophthalmus - status: 5-asm_done - taxon_id: '310915' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pangasianodon_hypophthalmus/fPanHyp1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pangasianodon_hypophthalmus/fPanHyp1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pangasianodon_hypophthalmus/fPanHyp1/genomic_data/pacbio/ - trio: '' - vglId: fPanHyp1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009829125.1 - class: Actinopterygii,Bony fishes - common_name: Korean giant-fin mudskipper - family: Gobiidae - hub: vgl - order: Gobiiformes - scientific_name: Periophthalmus magnuspinnatus - status: 8-NCBI - taxon_id: '409849' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Periophthalmus_magnuspinnatus/fPerMag1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Periophthalmus_magnuspinnatus/fPerMag1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Periophthalmus_magnuspinnatus/fPerMag1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Periophthalmus_magnuspinnatus/fPerMag1/genomic_data/pacbio/ - trio: '' - vglId: fPerMag1 - vgp_phase: phase2 -- asm: '#' - class: Aves,birds - common_name: blue jay - family: Corvidae - hub: vgl - order: Passeriformes - scientific_name: Cyanocitta cristata - status: 0-data_queued - taxon_id: '28727' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bCyaCri1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_014108235.1 - class: Mammalia,mammals - common_name: '' - family: Vespertilionidae - hub: others - order: Chiroptera - scientific_name: Myotis myotis - status: 8-NCBI - taxon_id: '51298' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Myotis_myotis/mMyoMyo1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Myotis_myotis/mMyoMyo1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Myotis_myotis/mMyoMyo1/genomic_data/phase/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Myotis_myotis/mMyoMyo1/genomic_data/pacbio/ - trio: '' - vglId: mMyoMyo1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_900963305.2 - class: Actinopterygii,Bony fishes - common_name: live sharksucker - family: Echeneidae - hub: others - order: Carangiformes - scientific_name: Echeneis naucrates - status: 8-NCBI - taxon_id: '173247' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Echeneis_naucrates/fEcheNa1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Echeneis_naucrates/fEcheNa1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Echeneis_naucrates/fEcheNa1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Echeneis_naucrates/fEcheNa1/genomic_data/pacbio/ - trio: '' - vglId: fEcheNa1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_017639745.1 - class: Actinopterygii,Bony fishes - common_name: Boeseman's rainbowfish - family: Melanotaeniidae - hub: others - order: Atheriniformes - scientific_name: Melanotaenia boesemani - status: 8-NCBI - taxon_id: '1250792' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melanotaenia_boesemani/fMelBoe1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melanotaenia_boesemani/fMelBoe1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melanotaenia_boesemani/fMelBoe1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melanotaenia_boesemani/fMelBoe1/genomic_data/pacbio/ - trio: '' - vglId: fMelBoe1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009769625.2 - class: Aves,birds - common_name: mute swan - family: Anatidae - hub: vgl - order: Anseriformes - scientific_name: Cygnus olor - status: 8-NCBI - taxon_id: '8869' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cygnus_olor/bCygOlo1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cygnus_olor/bCygOlo1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cygnus_olor/bCygOlo1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cygnus_olor/bCygOlo1/genomic_data/pacbio/ - trio: '' - vglId: bCygOlo1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_902148845.1 - class: Actinopterygii,Bony fishes - common_name: jewelled blenny - family: Blenniidae - hub: others - order: Blenniiformes - scientific_name: Salarias fasciatus - status: 8-NCBI - taxon_id: '181472' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Salarias_fasciatus/fSalaFa1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Salarias_fasciatus/fSalaFa1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Salarias_fasciatus/fSalaFa1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Salarias_fasciatus/fSalaFa1/genomic_data/pacbio/ - trio: '' - vglId: fSalaFa1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_901001165.2 - class: Actinopterygii,Bony fishes - common_name: river trout - family: Salmonidae - hub: vgl - order: Salmoniformes - scientific_name: Salmo trutta - status: 8-NCBI - taxon_id: '8032' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Salmo_trutta/fSalTru1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Salmo_trutta/fSalTru1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Salmo_trutta/fSalTru1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Salmo_trutta/fSalTru1/genomic_data/pacbio/ - trio: '' - vglId: fSalTru1 - vgp_phase: phase1 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: barbel - family: Cyprinidae - hub: others - order: Cypriniformes - scientific_name: Barbus barbus - status: 3-data_progress - taxon_id: '40830' - techs: - 10X: - status: 0 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 0 - url: '#' - ONT: - status: 0 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Barbus_barbus/fBarBab1/genomic_data/pacbio/ - trio: '' - vglId: fBarBab1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_900747795.4 - class: Actinopterygii,Bony fishes - common_name: reedfish - family: Polypteridae - hub: vgl - order: Polypteriformes - scientific_name: Erpetoichthys calabaricus - status: 8-NCBI - taxon_id: '27687' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erpetoichthys_calabaricus/fErpCal1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erpetoichthys_calabaricus/fErpCal1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erpetoichthys_calabaricus/fErpCal1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erpetoichthys_calabaricus/fErpCal1/genomic_data/pacbio/ - trio: '' - vglId: fErpCal1 - vgp_phase: phase1 -- asm: '#' - class: Reptilia,reptiles - common_name: diamondback terrapin - family: Emydidae - hub: vgl - order: Testudines - scientific_name: Malaclemys terrapin - status: 2-data_progress - taxon_id: '8485' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: rMalTer1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_014108245.1 - class: Mammalia,mammals - common_name: Kuhl's pipistrelle - family: Vespertilionidae - hub: others - order: Chiroptera - scientific_name: Pipistrellus kuhlii - status: 8-NCBI - taxon_id: '59472' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pipistrellus_kuhlii/mPipKuh1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pipistrellus_kuhlii/mPipKuh1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pipistrellus_kuhlii/mPipKuh1/genomic_data/phase/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pipistrellus_kuhlii/mPipKuh1/genomic_data/pacbio/ - trio: '' - vglId: mPipKuh1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009819605.1 - class: Aves,birds - common_name: Common tern - family: Laridae - hub: vgl - order: Charadriiformes - scientific_name: Sterna hirundo - status: 8-NCBI - taxon_id: '108405' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sterna_hirundo/bSteHir1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sterna_hirundo/bSteHir1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sterna_hirundo/bSteHir1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sterna_hirundo/bSteHir1/genomic_data/pacbio/ - trio: '' - vglId: bSteHir1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: seaside sparrow - family: Passerellidae - hub: vgl - order: Passeriformes - scientific_name: Ammodramus maritimus - status: 3-data_progress - taxon_id: '371905' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ammodramus_maritimus/bAmmMai1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ammodramus_maritimus/bAmmMai1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: bAmmMai1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_903684865.1 - class: Actinopterygii,Bony fishes - common_name: zebrafish - family: Danionidae - hub: others - order: Cypriniformes - scientific_name: Danio rerio - status: 7-NCBI - taxon_id: '7955' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - trio: '' - vglId: fDreABH1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: blue jay - family: Corvidae - hub: vgl - order: Passeriformes - scientific_name: Cyanocitta cristata - status: 1-DNA_isolation - taxon_id: '28727' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bCyaCri2 - vgp_phase: phase4 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_016699485.2 - class: Aves,birds - common_name: chicken - family: Phasianidae - hub: vgl - order: Galliformes - scientific_name: Gallus gallus - status: 8-NCBI - taxon_id: '9031' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gallus_gallus/bGalGal1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gallus_gallus/bGalGal1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gallus_gallus/bGalGal1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gallus_gallus/bGalGal1/genomic_data/pacbio/ - trio: bGalGal2/bGalGal3 - vglId: bGalGal1 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: alpaca - family: Camelidae - hub: vgl - order: Artiodactyla - scientific_name: Vicugna pacos - status: 0-data_queued - taxon_id: '30538' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: mVicPac1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_902362185.1 - class: Actinopterygii,Bony fishes - common_name: milkfish - family: Chanidae - hub: others - order: Gonorynchiformes - scientific_name: Chanos chanos - status: 8-NCBI - taxon_id: '29144' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chanos_chanos/fChaCha1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chanos_chanos/fChaCha1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chanos_chanos/fChaCha1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chanos_chanos/fChaCha1/genomic_data/pacbio/ - trio: '' - vglId: fChaCha1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: Savannah sparrow - family: Passerellidae - hub: vgl - order: Passeriformes - scientific_name: Passerculus sandwichensis - status: 3-data_progress - taxon_id: '161624' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Passerculus_sandwichensis/bPasSan1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Passerculus_sandwichensis/bPasSan1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: bPasSan1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_910596095.1 - class: Actinopterygii,Bony fishes - common_name: southern bluefin tuna - family: Scombridae - hub: others - order: Scombriformes - scientific_name: Thunnus maccoyii - status: 8-NCBI - taxon_id: '8240' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thunnus_maccoyii/fThuMac1/genomic_data/10x/ - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thunnus_maccoyii/fThuMac1/genomic_data/arima/ - Ilm: - status: 1 - url: '#' - ONT: - status: 1 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thunnus_maccoyii/fThuMac1/genomic_data/pacbio/ - trio: '' - vglId: fThuMac1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: chicken - family: Phasianidae - hub: vgl - order: Galliformes - scientific_name: Gallus gallus - status: 7-asm_curated - taxon_id: '9031' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: bGalGal5 - vgp_phase: other -- asm: '#' - class: Aves,birds - common_name: white-throated sparrow - family: Passerellidae - hub: vgl - order: Passeriformes - scientific_name: Zonotrichia albicollis - status: 0-data_queued - taxon_id: '44394' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bZonAlb1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_905319845.1 - class: Mammalia,mammals - common_name: Greenland wolf - family: Canidae - hub: others - order: Carnivora - scientific_name: Canis lupus orion - status: 8-NCBI - taxon_id: '2605939' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Canis_lupus_orion/mCanLor1/genomic_data/10x/ - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Canis_lupus_orion/mCanLor1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Canis_lupus_orion/mCanLor1/genomic_data/pacbio/ - trio: '' - vglId: mCanLor1 - vgp_phase: phase2 -- asm: '#' - class: Mammalia,mammals - common_name: Blainville's beaked whale - family: Ziphiidae - hub: vgl - order: Artiodactyla - scientific_name: Mesoplodon densirostris - status: 3-data_progress - taxon_id: '48708' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mesoplodon_densirostris/mMesDen1/genomic_data/bionano/ - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Mesoplodon_densirostris/mMesDen1/genomic_data/pacbio/ - trio: '' - vglId: mMesDen1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_015220715.1 - class: Actinopterygii,Bony fishes - common_name: red-bellied piranha - family: Serrasalmidae - hub: others - order: Characiformes - scientific_name: Pygocentrus nattereri - status: 8-NCBI - taxon_id: '42514' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pygocentrus_nattereri/fPygNat1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pygocentrus_nattereri/fPygNat1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pygocentrus_nattereri/fPygNat1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pygocentrus_nattereri/fPygNat1/genomic_data/pacbio/ - trio: '' - vglId: fPygNat1 - vgp_phase: phase1 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: stoplight loosejaw - family: Stomiidae - hub: others - order: Stomiiformes - scientific_name: Malacosteus niger - status: 3-data_progress - taxon_id: '76143' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Malacosteus_niger/fMalNig1/genomic_data/10x/ - BN: - status: 0 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Malacosteus_niger/fMalNig1/genomic_data/arima/ - Ilm: - status: 0 - url: '#' - ONT: - status: 0 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Malacosteus_niger/fMalNig1/genomic_data/pacbio/ - trio: '' - vglId: fMalNig1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_902150065.1 - class: Actinopterygii,Bony fishes - common_name: pinecone soldierfish - family: Holocentridae - hub: others - order: Holocentriformes - scientific_name: Myripristis murdjan - status: 8-NCBI - taxon_id: '586833' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Myripristis_murdjan/fMyrMur1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Myripristis_murdjan/fMyrMur1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Myripristis_murdjan/fMyrMur1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Myripristis_murdjan/fMyrMur1/genomic_data/pacbio/ - trio: '' - vglId: fMyrMur1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_010909765.2 - class: Chondrichthyes,cartilaginous fishes - common_name: thorny skate - family: Rajidae - hub: vgl - order: Rajiformes - scientific_name: Amblyraja radiata - status: 8-NCBI - taxon_id: '386614' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Amblyraja_radiata/sAmbRad1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Amblyraja_radiata/sAmbRad1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Amblyraja_radiata/sAmbRad1/genomic_data/arima/ - Ilm: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Amblyraja_radiata/sAmbRad1/genomic_data/illumina/ - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Amblyraja_radiata/sAmbRad1/genomic_data/pacbio/ - trio: '' - vglId: sAmbRad1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_014839995.1 - class: Actinopterygii,Bony fishes - common_name: freshwater garfish - family: Belonidae - hub: others - order: Beloniformes - scientific_name: Xenentodon cancila - status: 8-NCBI - taxon_id: '129108' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Xenentodon_cancila/fXenCan1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Xenentodon_cancila/fXenCan1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Xenentodon_cancila/fXenCan1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Xenentodon_cancila/fXenCan1/genomic_data/pacbio/ - trio: '' - vglId: fXenCan1 - vgp_phase: phase1 -- asm: '#' - class: Enteropneusta,jawless,Agnatha - common_name: acorn worm - family: Harrimaniidae - hub: vgl - order: Enteropneusta - scientific_name: Saccoglossus kowalevskii - status: 2-data_progress - taxon_id: '10224' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: kSacKow2 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_011762505.1 - class: Mammalia,mammals - common_name: African grass rat - family: Muridae - hub: vgl - order: Rodentia - scientific_name: Arvicanthis niloticus - status: 8-NCBI - taxon_id: '61156' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Arvicanthis_niloticus/mArvNil1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Arvicanthis_niloticus/mArvNil1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Arvicanthis_niloticus/mArvNil1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Arvicanthis_niloticus/mArvNil1/genomic_data/pacbio/ - trio: mArvNil2/mArvNil3 - vglId: mArvNil1 - vgp_phase: phase2 -- asm: '#' - class: Amphibia,amphibians - common_name: fire salamander - family: Salamandridae - hub: vgl - order: Caudata - scientific_name: Salamandra salamandra - status: 2-data_progress - taxon_id: '57571' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: aSalSal1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendropsophus_ebraccatus/aDenEbr1/assembly_nhgri_trio_1.6/ - class: Amphibia,amphibians - common_name: hourglass treefrog - family: Hylidae - hub: vgl - order: Anura - scientific_name: Dendropsophus ebraccatus - status: 6-asm_curation - taxon_id: '150705' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendropsophus_ebraccatus/aDenEbr1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendropsophus_ebraccatus/aDenEbr1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendropsophus_ebraccatus/aDenEbr1/genomic_data/arima/ - Ilm: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendropsophus_ebraccatus/aDenEbr1/genomic_data/illumina/ - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendropsophus_ebraccatus/aDenEbr1/genomic_data/pacbio/ - trio: aDenEbr4/aDenEbr5 - vglId: aDenEbr1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_014839835.1 - class: Aves,birds - common_name: Downy woodpecker - family: Picidae - hub: others - order: Piciformes - scientific_name: Dryobates pubescens - status: 8-NCBI - taxon_id: '118200' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dryobates_pubescens/bDryPub1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dryobates_pubescens/bDryPub1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dryobates_pubescens/bDryPub1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dryobates_pubescens/bDryPub1/genomic_data/pacbio/ - trio: '' - vglId: bDryPub1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_008658365.1 - class: Aves,birds - common_name: razorbill - family: Alcidae - hub: vgl - order: Charadriiformes - scientific_name: Alca torda - status: 8-NCBI - taxon_id: '28689' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Alca_torda/bAlcTor1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Alca_torda/bAlcTor1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Alca_torda/bAlcTor1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Alca_torda/bAlcTor1/genomic_data/pacbio/ - trio: '' - vglId: bAlcTor1 - vgp_phase: phase2 -- asm: '#' - class: Mammalia,mammals - common_name: slow loris - family: Lorisidae - hub: vgl - order: Primates - scientific_name: Nycticebus coucang - status: 3-data_progress - taxon_id: '9470' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Nycticebus_coucang/mNycCou1/genomic_data/bionano/ - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: mNycCou1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_015220075.1 - class: Aves,birds - common_name: gyrfalcon - family: Falconidae - hub: vgl - order: Falconiformes - scientific_name: Falco rusticolus - status: 8-NCBI - taxon_id: '120794' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_rusticolus/bFalRus1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_rusticolus/bFalRus1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_rusticolus/bFalRus1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_rusticolus/bFalRus1/genomic_data/pacbio/ - trio: '' - vglId: bFalRus1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_017639485.1 - class: Aves,birds - common_name: European golden plover - family: Charadriidae - hub: vgl - order: Charadriiformes - scientific_name: Pluvialis apricaria - status: 8-NCBI - taxon_id: '670352' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pluvialis_apricaria/bPluApr1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pluvialis_apricaria/bPluApr1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pluvialis_apricaria/bPluApr1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pluvialis_apricaria/bPluApr1/genomic_data/pacbio/ - trio: '' - vglId: bPluApr1 - vgp_phase: phase1 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: longfin smelt - family: Osmeridae - hub: vgl - order: Osmeriformes - scientific_name: Spirinchus thaleichthys - status: 3-data_progress - taxon_id: '260508' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Spirinchus_thaleichthys/fSpiTha1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: fSpiTha1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_902713615.2 - class: Chondrichthyes,cartilaginous fishes - common_name: smaller spotted catshark - family: Scyliorhinidae - hub: vgl - order: Carcharhiniformes - scientific_name: Scyliorhinus canicula - status: 8-NCBI - taxon_id: '7830' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scyliorhinus_canicula/sScyCan1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scyliorhinus_canicula/sScyCan1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scyliorhinus_canicula/sScyCan1/genomic_data/baylor-hic/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scyliorhinus_canicula/sScyCan1/genomic_data/pacbio/ - trio: '' - vglId: sScyCan1 - vgp_phase: phase1 -- asm: '#' - class: Amphibia,amphibians - common_name: tailed frog - family: Ascaphidae - hub: vgl - order: Anura - scientific_name: Ascaphus truei - status: 2-data_progress - taxon_id: '8439' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 3 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - vglId: aAscTru4 - vgp_phase: phase1 -- asm: '#' - class: Chondrichthyes,cartilaginous fishes - common_name: Caribbean electric ray - family: Narcinidae - hub: vgl - order: Torpediniformes - scientific_name: Narcine bancroftii - status: 2-data_progress - taxon_id: '1343680' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: sNarBan1 - vgp_phase: phase1 -- asm: '#' - class: Actinopteri,Bony fishes - common_name: banded killifish - family: Fundulidae - hub: vgl - order: Cyprinodontiformes - scientific_name: Fundulus diaphanus - status: 3-data_progress - taxon_id: '54267' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Fundulus_diaphanus/fFunDia1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Fundulus_diaphanus/fFunDia1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: fFunDia1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_017976325.1 - class: Actinopterygii,Bony fishes - common_name: copperband butterflyfish - family: Chaetodontidae - hub: others - order: Chaetodontiformes - scientific_name: Chelmon rostratus - status: 8-NCBI - taxon_id: '109905' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chelmon_rostratus/fCheRos1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chelmon_rostratus/fCheRos1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chelmon_rostratus/fCheRos1/genomic_data/hic/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chelmon_rostratus/fCheRos1/genomic_data/pacbio/ - trio: '' - vglId: fCheRos1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009762305.2 - class: Mammalia,mammals - common_name: California sea lion - family: Otariidae - hub: vgl - order: Carnivora - scientific_name: Zalophus californianus - status: 8-NCBI - taxon_id: '9704' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Zalophus_californianus/mZalCal1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Zalophus_californianus/mZalCal1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Zalophus_californianus/mZalCal1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Zalophus_californianus/mZalCal1/genomic_data/pacbio/ - trio: '' - vglId: mZalCal1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009819885.2 - class: Aves,birds - common_name: Swainson's thrush - family: Turdidae - hub: vgl - order: Passeriformes - scientific_name: Catharus ustulatus - status: 8-NCBI - taxon_id: '91951' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Catharus_ustulatus/bCatUst1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Catharus_ustulatus/bCatUst1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Catharus_ustulatus/bCatUst1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Catharus_ustulatus/bCatUst1/genomic_data/pacbio/ - trio: '' - vglId: bCatUst1 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiscyllium_ocellatum/sHemOce1/assembly_curated/ - class: Chondrichthyes,cartilaginous fishes - common_name: epaulette shark - family: Hemiscylliidae - hub: vgl - order: Orectolobiformes - scientific_name: Hemiscyllium ocellatum - status: 7-asm_curated - taxon_id: '170820' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiscyllium_ocellatum/sHemOce1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiscyllium_ocellatum/sHemOce1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiscyllium_ocellatum/sHemOce1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiscyllium_ocellatum/sHemOce1/genomic_data/pacbio/ - trio: '' - vglId: sHemOce1 - vgp_phase: phase1 -- asm: '#' - class: Amphibia,amphibians - common_name: Riggenbach's reed frog - family: Hyperoliidae - hub: vgl - order: Anura - scientific_name: Hyperolius riggenbachi - status: 2-data_progress - taxon_id: '752182' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 2 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: aHypRig1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_015220805.1 - class: Aves,birds - common_name: Red-fronted tinkerbird - family: Lybiidae - hub: vgl - order: Piciformes - scientific_name: Pogoniulus pusillus - status: 8-NCBI - taxon_id: '488313' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pogoniulus_pusillus/bPogPus1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pogoniulus_pusillus/bPogPus1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pogoniulus_pusillus/bPogPus1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pogoniulus_pusillus/bPogPus1/genomic_data/pacbio/ - trio: '' - vglId: bPogPus1 - vgp_phase: phase2 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Turdus_merula/bTurMer1/assembly_v0/ - class: Aves,birds - common_name: blackbird - family: Turdidae - hub: vgl - order: Passeriformes - scientific_name: Turdus merula - status: 5-asm_done - taxon_id: '9187' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Turdus_merula/bTurMer1/genomic_data/bionano/ - HiC: - status: 4 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Turdus_merula/bTurMer1/genomic_data/pacbio/ - trio: '' - vglId: bTurMer1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: Nelson's sparrow - family: Passerellidae - hub: vgl - order: Passeriformes - scientific_name: Ammospiza nelsoni - status: 3-data_progress - taxon_id: '2857394' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ammospiza_nelsoni/bAmmNel1/genomic_data/bionano/ - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: bAmmNel1 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiprocne_comata/bHemCom1/assembly_curated/ - class: Aves,birds - common_name: whiskered treeswift - family: Apodidae - hub: vgl - order: Apodiformes - scientific_name: Hemiprocne comata - status: 7-asm_curated - taxon_id: '243314' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiprocne_comata/bHemCom1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiprocne_comata/bHemCom1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiprocne_comata/bHemCom1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hemiprocne_comata/bHemCom1/genomic_data/pacbio/ - trio: '' - vglId: bHemCom1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: chicken - family: Phasianidae - hub: vgl - order: Galliformes - scientific_name: Gallus gallus - status: 7-asm_curated - taxon_id: '9031' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: bGalGal4 - vgp_phase: other -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Spatula_cyanoptera/bSpaCya1/assembly_vgp_standard_1.5/ - class: Aves,birds - common_name: cinnamon teal - family: Anatidae - hub: vgl - order: Anseriformes - scientific_name: Spatula cyanoptera - status: 5-asm_done - taxon_id: '75840' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Spatula_cyanoptera/bSpaCya1/genomic_data/bionano/ - HiC: - status: 4 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Spatula_cyanoptera/bSpaCya1/genomic_data/pacbio/ - trio: '' - vglId: bSpaCya1 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lemur_catta/mLemCat1/assembly_curated/ - class: Mammalia,mammals - common_name: Ring-tailed lemur - family: Lemuridae - hub: vgl - order: Lemuriformes - scientific_name: Lemur catta - status: 7-asm_curated - taxon_id: '9447' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lemur_catta/mLemCat1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lemur_catta/mLemCat1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lemur_catta/mLemCat1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lemur_catta/mLemCat1/genomic_data/pacbio/ - trio: '' - vglId: mLemCat1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: kagu - family: Rhynochetidae - hub: vgl - order: Gruiformes - scientific_name: Rhynochetos jubatus - status: 3-data_progress - taxon_id: '54386' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhynochetos_jubatus/bRhyJub1/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: bRhyJub1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_015220745.1 - class: Actinopterygii,Bony fishes - common_name: honeycomb rockfish - family: Sebastidae - hub: vgl - order: Perciformes - scientific_name: Sebastes umbrosus - status: 8-NCBI - taxon_id: '72105' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sebastes_umbrosus/fSebUmb1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sebastes_umbrosus/fSebUmb1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sebastes_umbrosus/fSebUmb1/genomic_data/hic/ - Ilm: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sebastes_umbrosus/fSebUmb1/genomic_data/illumina/ - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sebastes_umbrosus/fSebUmb1/genomic_data/pacbio/ - trio: '' - vglId: fSebUmb1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009769465.1 - class: Aves,birds - common_name: red-crested turaco - family: Musophagidae - hub: vgl - order: Musophagiformes - scientific_name: Tauraco erythrolophus - status: 8-NCBI - taxon_id: '121530' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tauraco_erythrolophus/bTauEry1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tauraco_erythrolophus/bTauEry1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tauraco_erythrolophus/bTauEry1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tauraco_erythrolophus/bTauEry1/genomic_data/pacbio/ - trio: '' - vglId: bTauEry1 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: gray short-tailed opossum - family: Didelphidae - hub: vgl - order: Didelphimorphia - scientific_name: Monodelphis domestica - status: 3-data_progress - taxon_id: '13616' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Monodelphis_domestica/mMonDom1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Monodelphis_domestica/mMonDom1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: mMonDom1 - vgp_phase: phase1 -- asm: '#' - class: Amphibia,amphibians - common_name: eastern narrow-mouthed toad - family: Microhylidae - hub: vgl - order: Anura - scientific_name: Gastrophryne carolinensis - status: 2-data_progress - taxon_id: '8429' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 3 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - vglId: aGasCar1 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: Eurasian badger - family: Mustelidae - hub: others - order: Carnivora - scientific_name: Meles meles - status: 3-data_progress - taxon_id: '9662' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Meles_meles/mMelMel3/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Meles_meles/mMelMel3/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Meles_meles/mMelMel3/genomic_data/arima/ - Ilm: - status: 0 - url: '#' - ONT: - status: 0 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Meles_meles/mMelMel3/genomic_data/pacbio/ - trio: mMelMel1/mMelMel2 - vglId: mMelMel3 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Porphyrio_hochstetteri/bPorHoc1/assembly_curated/ - class: Aves,birds - common_name: South Island takahe - family: Rallidae - hub: vgl - order: Gruiformes - scientific_name: Porphyrio hochstetteri - status: 7-asm_curated - taxon_id: '439704' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Porphyrio_hochstetteri/bPorHoc1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Porphyrio_hochstetteri/bPorHoc1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Porphyrio_hochstetteri/bPorHoc1/genomic_data/pacbio/ - trio: bPorHoc2/bPorHoc3 - vglId: bPorHoc1 - vgp_phase: phase2 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pholidichthys_leucotaenia/fPhoLeu1/assembly_curated/ - class: Actinopterygii,Bony fishes - common_name: convict blenny - family: Pholidichthyidae - hub: others - order: Cichliformes - scientific_name: Pholidichthys leucotaenia - status: 7-asm_curated - taxon_id: '390368' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pholidichthys_leucotaenia/fPhoLeu1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pholidichthys_leucotaenia/fPhoLeu1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pholidichthys_leucotaenia/fPhoLeu1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pholidichthys_leucotaenia/fPhoLeu1/genomic_data/pacbio/ - trio: '' - vglId: fPhoLeu1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_007399415.2 - class: Reptilia,reptiles - common_name: Goodes thornscrub tortoise - family: Testudinidae - hub: vgl - order: Testudines - scientific_name: Gopherus evgoodei - status: 8-NCBI - taxon_id: '1825980' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gopherus_evgoodei/rGopEvg1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gopherus_evgoodei/rGopEvg1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gopherus_evgoodei/rGopEvg1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gopherus_evgoodei/rGopEvg1/genomic_data/pacbio/ - trio: '' - vglId: rGopEvg1 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: Philippine flying lemur - family: Cynocephalidae - hub: vgl - order: Dermoptera - scientific_name: Cynocephalus volans - status: 1-DNA_isolation - taxon_id: '110931' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: mCynVol1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009764595.1 - class: Aves,birds - common_name: common yellowthroat - family: Parulidae - hub: vgl - order: Passeriformes - scientific_name: Geothlypis trichas - status: 8-NCBI - taxon_id: '135433' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Geothlypis_trichas/bGeoTri1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Geothlypis_trichas/bGeoTri1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Geothlypis_trichas/bGeoTri1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Geothlypis_trichas/bGeoTri1/genomic_data/pacbio/ - trio: '' - vglId: bGeoTri1 - vgp_phase: phase2 -- asm: '#' - class: Mammalia,mammals - common_name: Chinese pangolin - family: Manidae - hub: vgl - order: Pholidota - scientific_name: Manis pentadactyla - status: 3-data_progress - taxon_id: '143292' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Manis_pentadactyla/mManPen7/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: mManPen7 - vgp_phase: phase1 -- asm: '#' - class: Chondrichthyes,cartilaginous fishes - common_name: bramble shark - family: Echinorhinidae - hub: vgl - order: Echinorhiniformes - scientific_name: Echinorhinus brucus - status: 0-data_queued - taxon_id: '862826' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: sEchBru1 - vgp_phase: phase1 -- asm: '#' - class: Reptilia,reptiles - common_name: American alligator - family: Alligatoridae - hub: vgl - order: Crocodylia - scientific_name: Alligator mississippiensis - status: 3-data_progress - taxon_id: '8496' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Alligator_mississippiensis/rAllMis1/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: rAllMis1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Harpia_harpyja/bHarHar1/assembly_vgp_standard_2.0/ - class: Aves,birds - common_name: Harpy eagle - family: Accipitridae - hub: vgl - order: Falconiformes - scientific_name: Harpia harpyja - status: 6-asm_curation - taxon_id: '202280' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Harpia_harpyja/bHarHar1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Harpia_harpyja/bHarHar1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Harpia_harpyja/bHarHar1/genomic_data/pacbio/ - trio: '' - vglId: bHarHar1 - vgp_phase: phase3 -- asm: '#' - class: Mammalia,mammals - common_name: American pika - family: Ochotonidae - hub: vgl - order: Lagomorpha - scientific_name: Ochotona princeps - status: 2-data_progress - taxon_id: '9978' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - vglId: mOchPri1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Haemorhous_mexicanus/bHaeMex1/assembly_vgp_standard_2.0/ - class: Aves,birds - common_name: house finch - family: Fringillidae - hub: vgl - order: Passeriformes - scientific_name: Haemorhous mexicanus - status: 5-asm_done - taxon_id: '30427' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Haemorhous_mexicanus/bHaeMex1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Haemorhous_mexicanus/bHaeMex1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Haemorhous_mexicanus/bHaeMex1/genomic_data/pacbio/ - trio: '' - vglId: bHaeMex1 - vgp_phase: phase3 -- asm: '#' - class: Amphibia,amphibians - common_name: wood frog - family: Ranidae - hub: vgl - order: Anura - scientific_name: Rana sylvatica - status: 3-data_progress - taxon_id: '45438' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rana_sylvatica/aRanSyl1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - trio: '' - vglId: aRanSyl1 - vgp_phase: phase4 -- asm: '#' - class: Mammalia,mammals - common_name: grey whale - family: Eschrichtiidae - hub: vgl - order: Artiodactyla - scientific_name: Eschrichtius robustus - status: 3-data_progress - taxon_id: '9764' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Eschrichtius_robustus/mEscRob1/genomic_data/bionano/ - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: mEscRob1 - vgp_phase: phase2 -- asm: '#' - class: Mammalia,mammals - common_name: springhare - family: Pedetidae - hub: vgl - order: Rodentia - scientific_name: Pedetes capensis - status: 0-data_queued - taxon_id: '10023' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: mPedCap1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Apus_apus/bApuApu2/assembly_curated/ - class: Aves,birds - common_name: common swift - family: Apodidae - hub: others - order: Apodiformes - scientific_name: Apus apus - status: 7-asm_curated - taxon_id: '8895' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Apus_apus/bApuApu2/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Apus_apus/bApuApu2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Apus_apus/bApuApu2/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Apus_apus/bApuApu2/genomic_data/pacbio/ - trio: '' - vglId: bApuApu2 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009762535.1 - class: Actinopterygii,Bony fishes - common_name: New Zealand spotty - family: Labridae - hub: vgl - order: Perciformes - scientific_name: Notolabrus celidotus - status: 8-NCBI - taxon_id: '1203425' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Notolabrus_celidotus/fNotCel1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Notolabrus_celidotus/fNotCel1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Notolabrus_celidotus/fNotCel1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Notolabrus_celidotus/fNotCel1/genomic_data/pacbio/ - trio: '' - vglId: fNotCel1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009819775.1 - class: Aves,birds - common_name: American flamingo - family: Phoenicopteridae - hub: vgl - order: Phoenicopteriformes - scientific_name: Phoenicopterus ruber - status: 7-NCBI - taxon_id: '9217' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - trio: '' - vglId: bPhoRub1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_900246225.5 - class: Actinopterygii,Bony fishes - common_name: eastern happy - family: Cichlidae - hub: others - order: Cichliformes - scientific_name: Astatotilapia calliptera - status: 8-NCBI - taxon_id: '8154' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Astatotilapia_calliptera/fAstCal1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Astatotilapia_calliptera/fAstCal1/genomic_data/bionano/ - HiC: - status: 4 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Astatotilapia_calliptera/fAstCal1/genomic_data/pacbio/ - trio: '' - vglId: fAstCal1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_902686445.2 - class: Mammalia,mammals - common_name: gray squirrel - family: Sciuridae - hub: others - order: Rodentia - scientific_name: Sciurus carolinensis - status: 8-NCBI - taxon_id: '30640' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sciurus_carolinensis/mSciCar1/genomic_data/10x/ - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sciurus_carolinensis/mSciCar1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sciurus_carolinensis/mSciCar1/genomic_data/pacbio/ - trio: '' - vglId: mSciCar1 - vgp_phase: phase4 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_900634625.2 - class: Actinopterygii,Bony fishes - common_name: Indian glassy fish - family: Ambassidae - hub: vgl - order: Ovalentaria - scientific_name: Parambassis ranga - status: 8-NCBI - taxon_id: '210632' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Parambassis_ranga/fParRan2/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Parambassis_ranga/fParRan2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Parambassis_ranga/fParRan2/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Parambassis_ranga/fParRan2/genomic_data/pacbio/ - trio: '' - vglId: fParRan2 - vgp_phase: phase1 -- asm: '#' - class: Reptilia,reptiles - common_name: tarantolino - family: Sphaerodactylidae - hub: vgl - order: Squamata - scientific_name: Euleptes europaea - status: 3-data_progress - taxon_id: '460621' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Euleptes_europaea/rEulEur1/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: rEulEur1 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: Botta's pocket gopher - family: Geomyidae - hub: vgl - order: Rodentia - scientific_name: Thomomys bottae - status: 2-data_progress - taxon_id: '10013' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 3 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: mThoBot1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: blue-and-yellow macaw - family: Psittacidae - hub: vgl - order: Psittaciformes - scientific_name: Ara ararauna - status: 3-data_progress - taxon_id: '9226' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ara_ararauna/bAraAra1/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: bAraAra1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009764565.3 - class: Reptilia,reptiles - common_name: leatherback sea turtle - family: Dermochelyidae - hub: vgl - order: Testudines - scientific_name: Dermochelys coriacea - status: 8-NCBI - taxon_id: '27794' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dermochelys_coriacea/rDerCor1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dermochelys_coriacea/rDerCor1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dermochelys_coriacea/rDerCor1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dermochelys_coriacea/rDerCor1/genomic_data/pacbio/ - trio: '' - vglId: rDerCor1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: tawny frogmouth - family: Podargidae - hub: vgl - order: Caprimulgiformes - scientific_name: Podargus strigoides - status: 3-data_progress - taxon_id: '8905' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Podargus_strigoides/bPodStr1/genomic_data/bionano/ - HiC: - status: 2 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: bPodStr1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinolophus_sinicus/mRhiSin1/assembly_curated/ - class: Mammalia,mammals - common_name: Chinese rufous horseshoe bat - family: Rhinolophidae - hub: vgl - order: Chiroptera - scientific_name: Rhinolophus sinicus - status: 7-asm_curated - taxon_id: '89399' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinolophus_sinicus/mRhiSin1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinolophus_sinicus/mRhiSin1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinolophus_sinicus/mRhiSin1/genomic_data/pacbio/ - trio: '' - vglId: mRhiSin1 - vgp_phase: phase4 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_017639515.1 - class: Chondrichthyes,cartilaginous fishes - common_name: great white shark - family: Alopiidae - hub: vgl - order: Lamniformes - scientific_name: Carcharodon carcharias - status: 8-NCBI - taxon_id: '13397' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Carcharodon_carcharias/sCarCar2/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Carcharodon_carcharias/sCarCar2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Carcharodon_carcharias/sCarCar2/genomic_data/arima/ - Ilm: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Carcharodon_carcharias/sCarCar2/genomic_data/illumina/ - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Carcharodon_carcharias/sCarCar2/genomic_data/pacbio/ - trio: '' - vglId: sCarCar2 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: Asiatic elephant - family: Elephantidae - hub: vgl - order: Proboscidea - scientific_name: Elephas maximus - status: 2-data_progress - taxon_id: '9783' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 2 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - vglId: mEleMax1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_013358685.1 - class: Actinopterygii,Bony fishes - common_name: warty frogfish - family: Antennariidae - hub: others - order: Lophiiformes - scientific_name: Antennarius maculatus - status: 8-NCBI - taxon_id: '882753' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Antennarius_maculatus/fAntMac1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Antennarius_maculatus/fAntMac1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Antennarius_maculatus/fAntMac1/genomic_data/phase/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Antennarius_maculatus/fAntMac1/genomic_data/pacbio/ - trio: '' - vglId: fAntMac1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_017639555.1 - class: Aves,birds - common_name: maguari stork - family: Ciconiidae - hub: vgl - order: Ciconiiformes - scientific_name: Ciconia maguari - status: 8-NCBI - taxon_id: '52777' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ciconia_maguari/bCicMag1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ciconia_maguari/bCicMag1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ciconia_maguari/bCicMag1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ciconia_maguari/bCicMag1/genomic_data/pacbio/ - trio: '' - vglId: bCicMag1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_901699155.2 - class: Aves,birds - common_name: European turtle dove - family: Columbidae - hub: others - order: Columbiformes - scientific_name: Streptopelia turtur - status: 8-NCBI - taxon_id: '177155' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Streptopelia_turtur/bStrTur1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Streptopelia_turtur/bStrTur1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Streptopelia_turtur/bStrTur1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Streptopelia_turtur/bStrTur1/genomic_data/pacbio/ - trio: '' - vglId: bStrTur1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tamandua_tetradactyla/mTamTet1/assembly_vgp_standard_1.7/ - class: Mammalia,mammals - common_name: southern tamandua - family: Myrmecophagidae - hub: others - order: Pilosa - scientific_name: Tamandua tetradactyla - status: 5-asm_done - taxon_id: '48850' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tamandua_tetradactyla/mTamTet1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tamandua_tetradactyla/mTamTet1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tamandua_tetradactyla/mTamTet1/genomic_data/hic/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tamandua_tetradactyla/mTamTet1/genomic_data/pacbio/ - trio: '' - vglId: mTamTet1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erethizon_dorsatum/mEreDor1/assembly_vgp_standard_1.7/ - class: Mammalia,mammals - common_name: North American porcupine - family: Erethizontidae - hub: vgl - order: Rodentia - scientific_name: Erethizon dorsatum - status: 6-asm_curation - taxon_id: '34844' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erethizon_dorsatum/mEreDor1/genomic_data/10x/ - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erethizon_dorsatum/mEreDor1/genomic_data/arima/ - Ilm: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erethizon_dorsatum/mEreDor1/genomic_data/illumina/ - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Erethizon_dorsatum/mEreDor1/genomic_data/pacbio/ - trio: '' - vglId: mEreDor1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_011100635.1 - class: Mammalia,mammals - common_name: common brushtail - family: Phalangeridae - hub: vgl - order: Diprotodontia - scientific_name: Trichosurus vulpecula - status: 8-NCBI - taxon_id: '9337' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trichosurus_vulpecula/mTriVul1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trichosurus_vulpecula/mTriVul1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trichosurus_vulpecula/mTriVul1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trichosurus_vulpecula/mTriVul1/genomic_data/pacbio/ - trio: '' - vglId: mTriVul1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trogon_surrucura/bTroSur1/assembly_curated/ - class: Aves,birds - common_name: Suruca trogon - family: Trogonidae - hub: vgl - order: Trogoniformes - scientific_name: Trogon surrucura - status: 7-asm_curated - taxon_id: '297711' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trogon_surrucura/bTroSur1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trogon_surrucura/bTroSur1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trogon_surrucura/bTroSur1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Trogon_surrucura/bTroSur1/genomic_data/pacbio/ - trio: '' - vglId: bTroSur1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_003957565.2 - class: Aves,birds - common_name: zebra finch - family: Estrildidae - hub: vgl - order: Passeriformes - scientific_name: Taeniopygia guttata - status: 8-NCBI - taxon_id: '59729' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: bTaeGut1 - vgp_phase: other -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_011100535.2 - class: Mammalia,mammals - common_name: white-tufted-ear marmoset - family: Cebidae - hub: vgl - order: Primates - scientific_name: Callithrix jacchus - status: 8-NCBI - taxon_id: '9483' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - trio: mCalJac2/mCalJac3 - vglId: mCalJac1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: House wren - family: Certhiidae - hub: vgl - order: Passeriformes - scientific_name: Troglodytes aedon - status: 0-data_queued - taxon_id: '58211' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bTroAed1 - vgp_phase: phase2 -- asm: '#' - class: Mammalia,mammals - common_name: false killer whale - family: Delphinidae - hub: vgl - order: Artiodactyla - scientific_name: Pseudorca crassidens - status: 3-data_progress - taxon_id: '82174' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pseudorca_crassidens/mPseCra1/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pseudorca_crassidens/mPseCra1/genomic_data/pacbio/ - trio: '' - vglId: mPseCra1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_903992545.1 - class: Mammalia,mammals - common_name: common pipistrelle - family: Vespertilionidae - hub: others - order: Chiroptera - scientific_name: Pipistrellus pipistrellus - status: 8-NCBI - taxon_id: '59474' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pipistrellus_pipistrellus/mPipPip1/genomic_data/10x/ - BN: - status: 4 - url: '#' - HiC: - link: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pipistrellus_pipistrellus/mPipPip2/genomic_data/arima/ - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pipistrellus_pipistrellus/mPipPip1/genomic_data/pacbio/ - trio: '' - vglId: mPipPip1 - vgp_phase: phase4 -- asm: '#' - class: Amphibia,amphibians - common_name: Fleay's barred frog - family: Myobatrachidae - hub: vgl - order: Anura - scientific_name: Mixophyes fleayi - status: 0-data_queued - taxon_id: '000000' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: aMixFle1 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_biarmicus/bFalBia1/assembly_vgp_standard_2.0/ - class: Aves,birds - common_name: lanner falcon - family: Falconidae - hub: vgl - order: Falconiformes - scientific_name: Falco biarmicus - status: 6-asm_curation - taxon_id: '345155' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_biarmicus/bFalBia1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_biarmicus/bFalBia1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Falco_biarmicus/bFalBia1/genomic_data/pacbio/ - trio: '' - vglId: bFalBia1 - vgp_phase: phase4 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Nomonyx_dominicus/bNomDom1/assembly_vgp_standard_1.5/ - class: Aves,birds - common_name: Masked duck - family: Anatidae - hub: vgl - order: Anseriformes - scientific_name: Nomonyx dominicus - status: 5-asm_done - taxon_id: '555276' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Nomonyx_dominicus/bNomDom1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Nomonyx_dominicus/bNomDom1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Nomonyx_dominicus/bNomDom1/genomic_data/pacbio/ - trio: '' - vglId: bNomDom1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_008822115.3 - class: Aves,birds - common_name: zebra finch - family: Estrildidae - hub: vgl - order: Passeriformes - scientific_name: Taeniopygia guttata - status: 8-NCBI - taxon_id: '59729' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Taeniopygia_guttata/bTaeGut2/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Taeniopygia_guttata/bTaeGut2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Taeniopygia_guttata/bTaeGut2/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Taeniopygia_guttata/bTaeGut2/genomic_data/pacbio/ - trio: bTaeGut3/bTaeGut4 - vglId: bTaeGut2 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_016904835.1 - class: Aves,birds - common_name: rifleman - family: Acanthisittidae - hub: vgl - order: Passeriformes - scientific_name: Acanthisitta chloris - status: 8-NCBI - taxon_id: '57068' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acanthisitta_chloris/bAcaChl1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acanthisitta_chloris/bAcaChl1/genomic_data/bionano/ - HiC: - link: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acanthisitta_chloris/bAcaChl4/genomic_data/arima/ - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acanthisitta_chloris/bAcaChl1/genomic_data/pacbio/ - trio: '' - vglId: bAcaChl1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_014839685.1 - class: Actinopteri,Bony fishes - common_name: largescale foureyes - family: Anablepidae - hub: others - order: Cyprinodontiformes - scientific_name: Anableps anableps - status: 8-NCBI - taxon_id: '195821' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anableps_anableps/fAnaAna1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anableps_anableps/fAnaAna1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anableps_anableps/fAnaAna1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Anableps_anableps/fAnaAna1/genomic_data/pacbio/ - trio: '' - vglId: fAnaAna1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009764475.2 - class: Chondrichthyes,cartilaginous fishes - common_name: smalltooth sawfish - family: Pristidae - hub: vgl - order: Rhinopristiformes - scientific_name: Pristis pectinata - status: 8-NCBI - taxon_id: '685728' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pristis_pectinata/sPriPec2/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pristis_pectinata/sPriPec2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pristis_pectinata/sPriPec2/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pristis_pectinata/sPriPec2/genomic_data/pacbio/ - trio: '' - vglId: sPriPec2 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009769545.1 - class: Actinopterygii,Bony fishes - common_name: lumpfish - family: Cyclopteridae - hub: vgl - order: Scorpaeniformes - scientific_name: Cyclopterus lumpus - status: 8-NCBI - taxon_id: '8103' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cyclopterus_lumpus/fCycLum1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cyclopterus_lumpus/fCycLum1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cyclopterus_lumpus/fCycLum1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Cyclopterus_lumpus/fCycLum1/genomic_data/pacbio/ - trio: '' - vglId: fCycLum1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_902459505.2 - class: Amphibia,amphibians - common_name: Gabon caecilian - family: Dermophiidae - hub: others - order: Gymnophiona - scientific_name: Geotrypetes seraphini - status: 8-NCBI - taxon_id: '260995' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Geotrypetes_seraphini/aGeoSer1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Geotrypetes_seraphini/aGeoSer1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Geotrypetes_seraphini/aGeoSer1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Geotrypetes_seraphini/aGeoSer1/genomic_data/pacbio/ - trio: '' - vglId: aGeoSer1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: lammergeier - family: Accipitridae - hub: vgl - order: Falconiformes - scientific_name: Gypaetus barbatus - status: 3-data_progress - taxon_id: '33610' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gypaetus_barbatus/bGypBar2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gypaetus_barbatus/bGypBar2/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Gypaetus_barbatus/bGypBar2/genomic_data/pacbio/ - trio: '' - vglId: bGypBar2 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_016695395.2 - class: Mammalia,mammals - common_name: human - family: Hominidae - hub: vgl - order: Primates - scientific_name: Homo sapiens - status: 8-NCBI - taxon_id: '9606' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Homo_sapiens/mHomSap3/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Homo_sapiens/mHomSap3/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Homo_sapiens/mHomSap3/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Homo_sapiens/mHomSap3/genomic_data/pacbio/ - trio: mHomSap1/mHomSap2 - vglId: mHomSap3 - vgp_phase: phase1 -- asm: '#' - class: Reptilia,reptiles - common_name: European pond turtle - family: Emydidae - hub: vgl - order: Testudines - scientific_name: Emys orbicularis - status: 3-data_progress - taxon_id: '82168' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Emys_orbicularis/rEmyOrb1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Emys_orbicularis/rEmyOrb1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Emys_orbicularis/rEmyOrb1/genomic_data/pacbio/ - trio: '' - vglId: rEmyOrb1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: Seychelles magpie-robin - family: Muscicapidae - hub: vgl - order: Passeriformes - scientific_name: Copsychus sechellarum - status: 2-data_progress - taxon_id: '797021' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bCopSec1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_903992535.2 - class: Mammalia,mammals - common_name: Eurasian water vole - family: Cricetidae - hub: others - order: Rodentia - scientific_name: Arvicola amphibius - status: 8-NCBI - taxon_id: '1047088' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Arvicola_amphibius/mArvAmp1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Arvicola_amphibius/mArvAmp1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Arvicola_amphibius/mArvAmp1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Arvicola_amphibius/mArvAmp1/genomic_data/pacbio/ - trio: '' - vglId: mArvAmp1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009819535.1 - class: Reptilia,reptiles - common_name: sand lizard - family: Lacertidae - hub: vgl - order: Squamata - scientific_name: Lacerta agilis - status: 8-NCBI - taxon_id: '80427' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lacerta_agilis/rLacAgi1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lacerta_agilis/rLacAgi1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lacerta_agilis/rLacAgi1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lacerta_agilis/rLacAgi1/genomic_data/pacbio/ - trio: '' - vglId: rLacAgi1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pan_troglodytes/mPanTro1/assembly_vgp_standard_1.6/ - class: Mammalia,mammals - common_name: chimpanzee - family: Hominidae - hub: others - order: Primates - scientific_name: Pan troglodytes - status: 5-asm_done - taxon_id: '9598' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pan_troglodytes/mPanTro1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pan_troglodytes/mPanTro1/genomic_data/bionano/ - HiC: - status: 4 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pan_troglodytes/mPanTro1/genomic_data/pacbio/ - trio: '' - vglId: mPanTro1 - vgp_phase: phase4 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_901001135.2 - class: Amphibia,amphibians - common_name: two-lined caecilian - family: Rhinatrematidae - hub: others - order: Apoda - scientific_name: Rhinatrema bivittatum - status: 8-NCBI - taxon_id: '194408' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinatrema_bivittatum/aRhiBiv1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinatrema_bivittatum/aRhiBiv1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinatrema_bivittatum/aRhiBiv1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhinatrema_bivittatum/aRhiBiv1/genomic_data/pacbio/ - trio: '' - vglId: aRhiBiv1 - vgp_phase: phase1 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: lesser salmon catfish - family: Ariidae - hub: vgl - order: Siluriformes - scientific_name: Neoarius graeffei - status: 3-data_progress - taxon_id: '443677' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Neoarius_graeffei/fNeoGra1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Neoarius_graeffei/fNeoGra1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: fNeoGra1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_902686455.2 - class: Mammalia,mammals - common_name: Eurasian red squirrel - family: Sciuridae - hub: vgl - order: Rodentia - scientific_name: Sciurus vulgaris - status: 8-NCBI - taxon_id: '55149' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sciurus_vulgaris/mSciVul1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sciurus_vulgaris/mSciVul1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sciurus_vulgaris/mSciVul1/genomic_data/baylor-hic/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sciurus_vulgaris/mSciVul1/genomic_data/pacbio/ - trio: '' - vglId: mSciVul1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_901709675.1 - class: Actinopterygii,Bony fishes - common_name: greater pipefish - family: Syngnathidae - hub: others - order: Syngnathiformes - scientific_name: Syngnathus acus - status: 8-NCBI - taxon_id: '161584' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Syngnathus_acus/fSynAcu1/genomic_data/10x/ - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Syngnathus_acus/fSynAcu1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Syngnathus_acus/fSynAcu1/genomic_data/pacbio/ - trio: '' - vglId: fSynAcu1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: white-breasted nuthatch - family: Sittidae - hub: vgl - order: Passeriformes - scientific_name: Sitta carolinensis - status: 0-data_queued - taxon_id: '50250' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bSitCar1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_902500255.1 - class: Actinopterygii,Bony fishes - common_name: prehistoric monster fish - family: Batrachoididae - hub: others - order: Batrachoidiformes - scientific_name: Thalassophryne amazonica - status: 8-NCBI - taxon_id: '390379' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thalassophryne_amazonica/fThaAma1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thalassophryne_amazonica/fThaAma1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thalassophryne_amazonica/fThaAma1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Thalassophryne_amazonica/fThaAma1/genomic_data/pacbio/ - trio: '' - vglId: fThaAma1 - vgp_phase: phase1 -- asm: '#' - class: Amphibia,amphibians - common_name: Puerto Rican coqui - family: Eleutherodactylidae - hub: vgl - order: Anura - scientific_name: Eleutherodactylus coqui - status: 2-data_progress - taxon_id: '57060' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 2 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: aEleCoq1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_003957555.1 - class: Aves,birds - common_name: Anna's hummingbird - family: Trochilidae - hub: others - order: Apodiformes - scientific_name: Calypte anna - status: 8-NCBI - taxon_id: '9244' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Calypte_anna/bCalAnn1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Calypte_anna/bCalAnn1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Calypte_anna/bCalAnn1/genomic_data/phase/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Calypte_anna/bCalAnn1/genomic_data/pacbio/ - trio: '' - vglId: bCalAnn1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_013358815.1 - class: Actinopterygii,Bony fishes - common_name: electric eel - family: Gymnotidae - hub: others - order: Gymnotiformes - scientific_name: Electrophorus electricus - status: 8-NCBI - taxon_id: '8005' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Electrophorus_electricus/fEleEle1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Electrophorus_electricus/fEleEle1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Electrophorus_electricus/fEleEle1/genomic_data/hic/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Electrophorus_electricus/fEleEle1/genomic_data/pacbio/ - trio: '' - vglId: fEleEle1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009819595.1 - class: Aves,birds - common_name: carmine bee-eater - family: Meropidae - hub: vgl - order: Coraciiformes - scientific_name: Merops nubicus - status: 8-NCBI - taxon_id: '57421' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Merops_nubicus/bMerNub1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Merops_nubicus/bMerNub1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Merops_nubicus/bMerNub1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Merops_nubicus/bMerNub1/genomic_data/pacbio/ - trio: '' - vglId: bMerNub1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendrocygna_viduata/bDenVid1/assembly_vgp_standard_1.5/ - class: Aves,birds - common_name: white-faced whistling-duck - family: Anatidae - hub: vgl - order: Anseriformes - scientific_name: Dendrocygna viduata - status: 5-asm_done - taxon_id: '8876' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendrocygna_viduata/bDenVid1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendrocygna_viduata/bDenVid1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dendrocygna_viduata/bDenVid1/genomic_data/pacbio/ - trio: '' - vglId: bDenVid1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_902459465.1 - class: Asteroidea,echinoderms - common_name: European starfish - family: Asteriidae - hub: others - order: Forcipulatida - scientific_name: Asterias rubens - status: 8-NCBI - taxon_id: '7604' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Asterias_rubens/eAstRub1/genomic_data/dovetail/ - Ilm: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Asterias_rubens/eAstRub1/genomic_data/illumina/ - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Asterias_rubens/eAstRub1/genomic_data/pacbio/ - trio: '' - vglId: eAstRub1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009873245.2 - class: Mammalia,mammals - common_name: Blue whale - family: Balaenopteridae - hub: others - order: Artiodactyla - scientific_name: Balaenoptera musculus - status: 8-NCBI - taxon_id: '9771' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Balaenoptera_musculus/mBalMus1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Balaenoptera_musculus/mBalMus1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Balaenoptera_musculus/mBalMus1/genomic_data/dovetail/ - Ilm: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Balaenoptera_musculus/mBalMus1/genomic_data/illumina/ - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Balaenoptera_musculus/mBalMus1/genomic_data/pacbio/ - trio: '' - vglId: mBalMus1 - vgp_phase: phase2 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Corvus_hawaiiensis/bCorHaw1/assembly_curated/ - class: Aves,birds - common_name: hawaiian crow - family: Corvidae - hub: vgl - order: Passeriformes - scientific_name: Corvus hawaiiensis - status: 7-asm_curated - taxon_id: '134902' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Corvus_hawaiiensis/bCorHaw1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Corvus_hawaiiensis/bCorHaw1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Corvus_hawaiiensis/bCorHaw1/genomic_data/pacbio/ - trio: '' - vglId: bCorHaw1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_015852505.1 - class: Mammalia,mammals - common_name: Australian echidna - family: Tachyglossidae - hub: vgl - order: Monotremata - scientific_name: Tachyglossus aculeatus - status: 8-NCBI - taxon_id: '9261' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tachyglossus_aculeatus/mTacAcu1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tachyglossus_aculeatus/mTacAcu1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tachyglossus_aculeatus/mTacAcu1/genomic_data/phase/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tachyglossus_aculeatus/mTacAcu1/genomic_data/pacbio/ - trio: '' - vglId: mTacAcu1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_013368585.1 - class: Actinopterygii,Bony fishes - common_name: Indo-Pacific tarpon - family: Megalopidae - hub: others - order: Elopiformes - scientific_name: Megalops cyprinoides - status: 8-NCBI - taxon_id: '118141' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Megalops_cyprinoides/fMegCyp1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Megalops_cyprinoides/fMegCyp1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Megalops_cyprinoides/fMegCyp1/genomic_data/hic/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Megalops_cyprinoides/fMegCyp1/genomic_data/pacbio/ - trio: '' - vglId: fMegCyp1 - vgp_phase: phase1 -- asm: '#' - class: Cephalopoda,molluscs - common_name: lesser Pacific striped octopus - family: Octopodidae - hub: vgl - order: Octopoda - scientific_name: Octopus chierchiae - status: 2-data_progress - taxon_id: '1690670' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 3 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - vglId: xOctChi1 - vgp_phase: phase2 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: shanny - family: Blenniidae - hub: others - order: Blenniiformes - scientific_name: Lipophrys pholis - status: 3-data_progress - taxon_id: '56720' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lipophrys_pholis/fLipPho2/genomic_data/10x/ - BN: - status: 0 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lipophrys_pholis/fLipPho2/genomic_data/arima/ - Ilm: - status: 0 - url: '#' - ONT: - status: 0 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lipophrys_pholis/fLipPho2/genomic_data/pacbio/ - trio: '' - vglId: fLipPho2 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: Whooping crane - family: Gruidae - hub: vgl - order: Gruiformes - scientific_name: Grus americana - status: 3-data_progress - taxon_id: '9117' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Grus_americana/bGruAme1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Grus_americana/bGruAme1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Grus_americana/bGruAme1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Grus_americana/bGruAme1/genomic_data/pacbio/ - trio: bGruAme2/bGruAme3 - vglId: bGruAme1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: red-winged blackbird - family: Icteridae - hub: vgl - order: Passeriformes - scientific_name: Agelaius phoeniceus - status: 1-DNA_isolation - taxon_id: '39638' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bAgePho1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: grey catbird - family: Mimidae - hub: vgl - order: Passeriformes - scientific_name: Dumetella carolinensis - status: 0-data_queued - taxon_id: '111981' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bDumCar1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_019393635.1 - class: Mammalia,mammals - common_name: monito del monte - family: Microbiotheriidae - hub: others - order: Microbiotheria - scientific_name: Dromiciops gliroides - status: 8-NCBI - taxon_id: '33562' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dromiciops_gliroides/mDroGli1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dromiciops_gliroides/mDroGli1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dromiciops_gliroides/mDroGli1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Dromiciops_gliroides/mDroGli1/genomic_data/pacbio/ - trio: '' - vglId: mDroGli1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_012275275.1 - class: Aves,birds - common_name: budgerigar - family: Psittaculidae - hub: vgl - order: Psittaciformes - scientific_name: Melopsittacus undulatus - status: 8-NCBI - taxon_id: '13146' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melopsittacus_undulatus/bMelUnd1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melopsittacus_undulatus/bMelUnd1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melopsittacus_undulatus/bMelUnd1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Melopsittacus_undulatus/bMelUnd1/genomic_data/pacbio/ - trio: bMelUnd2/bMelUnd3 - vglId: bMelUnd1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_015227675.2 - class: Mammalia,mammals - common_name: Norway rat - family: Muridae - hub: others - order: Rodentia - scientific_name: Rattus norvegicus - status: 7-NCBI - taxon_id: '10116' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - trio: '' - vglId: mRatNor1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: Common starling - family: Sturnidae - hub: vgl - order: Passeriformes - scientific_name: Sturnus vulgaris - status: 1-DNA_isolation - taxon_id: '9172' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bStuVul1 - vgp_phase: phase2 -- asm: '#' - class: Mammalia,mammals - common_name: pygmy sperm whale - family: Physeteridae - hub: vgl - order: Artiodactyla - scientific_name: Kogia breviceps - status: 3-data_progress - taxon_id: '27615' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Kogia_breviceps/mKogBre1/genomic_data/bionano/ - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Kogia_breviceps/mKogBre1/genomic_data/pacbio/ - trio: '' - vglId: mKogBre1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009829145.1 - class: Aves,birds - common_name: lance-tailed manakin - family: Pipridae - hub: vgl - order: Passeriformes - scientific_name: Chiroxiphia lanceolata - status: 8-NCBI - taxon_id: '296741' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chiroxiphia_lanceolata/bChiLan1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chiroxiphia_lanceolata/bChiLan1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chiroxiphia_lanceolata/bChiLan1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Chiroxiphia_lanceolata/bChiLan1/genomic_data/pacbio/ - trio: '' - vglId: bChiLan1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pelecanus_crispus/bPelCri1/assembly_vgp_standard_2.1/ - class: Aves,birds - common_name: Dalmatian pelican - family: Pelecanidae - hub: others - order: Pelecaniformes - scientific_name: Pelecanus crispus - status: 5-asm_done - taxon_id: '36300' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pelecanus_crispus/bPelCri1/genomic_data/bionano/ - HiC: - status: 4 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pelecanus_crispus/bPelCri1/genomic_data/pacbio/ - trio: '' - vglId: bPelCri1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009650955.1 - class: Aves,birds - common_name: New Caledonian crow - family: Corvidae - hub: vgl - order: Passeriformes - scientific_name: Corvus moneduloides - status: 8-NCBI - taxon_id: '1196302' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Corvus_moneduloides/bCorMon1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Corvus_moneduloides/bCorMon1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Corvus_moneduloides/bCorMon1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Corvus_moneduloides/bCorMon1/genomic_data/pacbio/ - trio: '' - vglId: bCorMon1 - vgp_phase: phase4 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Suncus_etruscus/mSunEtr1/assembly_vgp_standard_1.7/ - class: Mammalia,mammals - common_name: white-toothed pygmy shrew - family: Soricidae - hub: vgl - order: Eulipotyphla - scientific_name: Suncus etruscus - status: 6-asm_curation - taxon_id: '109475' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Suncus_etruscus/mSunEtr1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Suncus_etruscus/mSunEtr1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Suncus_etruscus/mSunEtr1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Suncus_etruscus/mSunEtr1/genomic_data/pacbio/ - trio: '' - vglId: mSunEtr1 - vgp_phase: phase1 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Theristicus_caerulescens/bTheCae1/assembly_curated/ - class: Aves,birds - common_name: plumbeous ibis - family: Threskiornithidae - hub: vgl - order: Pelecaniformes - scientific_name: Theristicus caerulescens - status: 7-asm_curated - taxon_id: '1118847' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Theristicus_caerulescens/bTheCae1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Theristicus_caerulescens/bTheCae1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Theristicus_caerulescens/bTheCae1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Theristicus_caerulescens/bTheCae1/genomic_data/pacbio/ - trio: '' - vglId: bTheCae1 - vgp_phase: phase1 -- asm: '#' - class: Amphibia,amphibians - common_name: rufous frog - family: Leptodactylidae - hub: vgl - order: Anura - scientific_name: Leptodactylus fuscus - status: 2-data_progress - taxon_id: '238119' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 2 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: aLepFus1 - vgp_phase: phase2 -- asm: '#' - class: Amphibia,amphibians - common_name: Sardinian tree frog - family: Hylidae - hub: vgl - order: Anura - scientific_name: Hyla sarda - status: 2-data_progress - taxon_id: '327740' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - vglId: aHylSar1 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Danio_rerio/fDreSAT1/assembly_curated/ - class: Actinopterygii,Bony fishes - common_name: zebrafish - family: Danionidae - hub: others - order: Cypriniformes - scientific_name: Danio rerio - status: 7-asm_curated - taxon_id: '7955' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Danio_rerio/fDreSAT1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Danio_rerio/fDreSAT1/genomic_data/bionano/ - HiC: - status: 4 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Danio_rerio/fDreSAT1/genomic_data/pacbio/ - trio: '' - vglId: fDreSAT1 - vgp_phase: phase1 -- asm: '#' - class: Mammalia,mammals - common_name: North Atlantic right whale - family: Balaenidae - hub: vgl - order: Artiodactyla - scientific_name: Eubalaena glacialis - status: 3-data_progress - taxon_id: '27606' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Eubalaena_glacialis/mEubGla1/genomic_data/bionano/ - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Eubalaena_glacialis/mEubGla1/genomic_data/pacbio/ - trio: '' - vglId: mEubGla1 - vgp_phase: phase2 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: red shiner - family: Leuciscidae - hub: vgl - order: Cypriniformes - scientific_name: Cyprinella lutrensis - status: 0-data_queued - taxon_id: '28791' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: fCypLut1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_015220235.1 - class: Mammalia,mammals - common_name: southern two-toed sloth - family: Megalonychidae - hub: vgl - order: Folivora - scientific_name: Choloepus didactylus - status: 8-NCBI - taxon_id: '27675' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Choloepus_didactylus/mChoDid1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Choloepus_didactylus/mChoDid1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Choloepus_didactylus/mChoDid1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Choloepus_didactylus/mChoDid1/genomic_data/pacbio/ - trio: '' - vglId: mChoDid1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_014108415.1 - class: Mammalia,mammals - common_name: Pallas's mastiff bat - family: Molossidae - hub: others - order: Chiroptera - scientific_name: Molossus molossus - status: 8-NCBI - taxon_id: '27622' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Molossus_molossus/mMolMol1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Molossus_molossus/mMolMol1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Molossus_molossus/mMolMol1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Molossus_molossus/mMolMol1/genomic_data/pacbio/ - trio: '' - vglId: mMolMol1 - vgp_phase: phase2 -- asm: '#' - class: Aves,birds - common_name: common myna - family: Sturnidae - hub: vgl - order: Passeriformes - scientific_name: Acridotheres tristis - status: 3-data_progress - taxon_id: '279927' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acridotheres_tristis/bAcrTri1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acridotheres_tristis/bAcrTri1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acridotheres_tristis/bAcrTri1/genomic_data/pacbio/ - trio: '' - vglId: bAcrTri1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_910591455.1 - class: Actinopterygii,Bony fishes - common_name: rock gunnel - family: Pholidae - hub: others - order: Perciformes - scientific_name: Pholis gunnellus - status: 8-NCBI - taxon_id: '56726' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pholis_gunnellus/fPhoGun1/genomic_data/10x/ - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pholis_gunnellus/fPhoGun1/genomic_data/arima/ - Ilm: - status: 1 - url: '#' - ONT: - status: 1 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pholis_gunnellus/fPhoGun1/genomic_data/pacbio/ - trio: '' - vglId: fPhoGun1 - vgp_phase: phase2 -- asm: '#' - class: Chondrichthyes,cartilaginous fishes - common_name: gold dust stingray - family: Potamotrygonidae - hub: vgl - order: Myliobatiformes - scientific_name: Potamotrygon marinae - status: 3-data_progress - taxon_id: '000000' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Potamotrygon_marinae/sPotMar1/genomic_data/arima/ - Ilm: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Potamotrygon_marinae/sPotMar1/genomic_data/illumina/ - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Potamotrygon_marinae/sPotMar1/genomic_data/pacbio/ - trio: '' - vglId: sPotMar1 - vgp_phase: phase1 -- asm: '#' - class: Amphibia,amphibians - common_name: plains spadefoot toad - family: Pelobatidae - hub: vgl - order: Anura - scientific_name: Spea bombifrons - status: 3-data_progress - taxon_id: '233779' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Spea_bombifrons/aSpeBom1/genomic_data/bionano/ - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: aSpeBom1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_011762595.1 - class: Mammalia,mammals - common_name: common bottlenose dolphin - family: Delphinidae - hub: vgl - order: Artiodactyla - scientific_name: Tursiops truncatus - status: 8-NCBI - taxon_id: '9739' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tursiops_truncatus/mTurTru1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tursiops_truncatus/mTurTru1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tursiops_truncatus/mTurTru1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Tursiops_truncatus/mTurTru1/genomic_data/pacbio/ - trio: mTurTru2/mTurTru3 - vglId: mTurTru1 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Vidua_chalybeata/bVidCha1/assembly_vgp_standard_1.5/ - class: Aves,birds - common_name: village indigobird - family: Estrildidae - hub: vgl - order: Passeriformes - scientific_name: Vidua chalybeata - status: 5-asm_done - taxon_id: '81927' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 4 - url: '#' - HiC: - link: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Vidua_chalybeata/bVidCha2/genomic_data/arima/ - status: 1 - url: '#' - Ilm: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Vidua_chalybeata/bVidCha1/genomic_data/illumina/ - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Vidua_chalybeata/bVidCha1/genomic_data/pacbio/ - trio: '' - vglId: bVidCha1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_009819795.1 - class: Aves,birds - common_name: tufted duck - family: Anatidae - hub: vgl - order: Anseriformes - scientific_name: Aythya fuligula - status: 8-NCBI - taxon_id: '219594' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aythya_fuligula/bAytFul2/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aythya_fuligula/bAytFul2/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aythya_fuligula/bAytFul2/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aythya_fuligula/bAytFul2/genomic_data/pacbio/ - trio: '' - vglId: bAytFul2 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_910589615.1 - class: Actinopterygii,Bony fishes - common_name: longspined bullhead - family: Cottidae - hub: others - order: Perciformes - scientific_name: Taurulus bubalis - status: 8-NCBI - taxon_id: '61643' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Taurulus_bubalis/fTauBub2/genomic_data/10x/ - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Taurulus_bubalis/fTauBub2/genomic_data/arima/ - Ilm: - status: 1 - url: '#' - ONT: - status: 1 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Taurulus_bubalis/fTauBub2/genomic_data/pacbio/ - trio: '' - vglId: fTauBub2 - vgp_phase: phase2 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: Adriatic sturgeon - family: Acipenseridae - hub: vgl - order: Acipenseriformes - scientific_name: Acipenser naccarii - status: 3-data_progress - taxon_id: '42330' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Acipenser_naccarii/fAciNac1/genomic_data/bionano/ - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: fAciNac1 - vgp_phase: phase4 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: rainbow smelt - family: Osmeridae - hub: vgl - order: Osmeriformes - scientific_name: Osmerus mordax - status: 3-data_progress - taxon_id: '8014' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Osmerus_mordax/fOsmMor3/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Osmerus_mordax/fOsmMor3/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: fOsmMor3 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: Black-capped chickadee - family: Paridae - hub: vgl - order: Passeriformes - scientific_name: Poecile atricapillus - status: 1-DNA_isolation - taxon_id: '48891' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bPoeAtr1 - vgp_phase: phase3 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Branta_leucopsis/bBraLeu1/assembly_vgp_standard_1.5/ - class: Aves,birds - common_name: barnacle goose - family: Anatidae - hub: vgl - order: Anseriformes - scientific_name: Branta leucopsis - status: 5-asm_done - taxon_id: '184711' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Branta_leucopsis/bBraLeu1/genomic_data/bionano/ - HiC: - status: 4 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Branta_leucopsis/bBraLeu1/genomic_data/pacbio/ - trio: '' - vglId: bBraLeu1 - vgp_phase: phase3 -- asm: '#' - class: Reptilia,reptiles - common_name: eastern musk turtle - family: Kinosternidae - hub: vgl - order: Testudines - scientific_name: Sternotherus odoratus - status: 2-data_progress - taxon_id: '142480' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: rSteOdo1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: chipping sparrow - family: Passerellidae - hub: vgl - order: Passeriformes - scientific_name: Spizella passerina - status: 0-data_queued - taxon_id: '40210' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bSpiPas1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009769605.1 - class: Aves,birds - common_name: Abyssinian ground-hornbill - family: Bucorvidae - hub: vgl - order: Bucerotiformes - scientific_name: Bucorvus abyssinicus - status: 8-NCBI - taxon_id: '153643' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bucorvus_abyssinicus/bBucAby1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bucorvus_abyssinicus/bBucAby1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bucorvus_abyssinicus/bBucAby1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Bucorvus_abyssinicus/bBucAby1/genomic_data/pacbio/ - trio: '' - vglId: bBucAby1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_004115215.2 - class: Mammalia,mammals - common_name: platypus - family: Ornithorhynchidae - hub: vgl - order: Monotremata - scientific_name: Ornithorhynchus anatinus - status: 8-NCBI - taxon_id: '9258' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ornithorhynchus_anatinus/mOrnAna1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ornithorhynchus_anatinus/mOrnAna1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ornithorhynchus_anatinus/mOrnAna1/genomic_data/phase/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ornithorhynchus_anatinus/mOrnAna1/genomic_data/pacbio/ - trio: '' - vglId: mOrnAna1 - vgp_phase: phase1 -- asm: '#' - class: Reptilia,reptiles - common_name: Atlantic ridley - family: Cheloniidae - hub: vgl - order: Testudines - scientific_name: Lepidochelys kempii - status: 0-data_queued - taxon_id: '8472' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: rLepKem1 - vgp_phase: phase3 -- asm: '#' - class: Aves,birds - common_name: saltmarsh sparrow - family: Passerellidae - hub: vgl - order: Passeriformes - scientific_name: Ammodramus caudacutus - status: 3-data_progress - taxon_id: '69262' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Ammodramus_caudacutus/bAmmCau1/genomic_data/bionano/ - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - trio: '' - vglId: bAmmCau1 - vgp_phase: phase4 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_008692025.1 - class: Mammalia,mammals - common_name: vaquita - family: Phocoenidae - hub: vgl - order: Artiodactyla - scientific_name: Phocoena sinus - status: 8-NCBI - taxon_id: '42100' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Phocoena_sinus/mPhoSin1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Phocoena_sinus/mPhoSin1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Phocoena_sinus/mPhoSin1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Phocoena_sinus/mPhoSin1/genomic_data/pacbio/ - trio: '' - vglId: mPhoSin1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: lesser rhea - family: Rheidae - hub: vgl - order: Rheiformes - scientific_name: Rhea pennata - status: 3-data_progress - taxon_id: '8795' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhea_pennata/bPtePen1/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: bPtePen1 - vgp_phase: phase2 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: chub mackerel - family: Scombridae - hub: vgl - order: Scombriformes - scientific_name: Scomber japonicus - status: 3-data_progress - taxon_id: '13676' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scomber_japonicus/fScoJap1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Scomber_japonicus/fScoJap1/genomic_data/pacbio/ - trio: '' - vglId: fScoJap1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_905171775.1 - class: Amphibia,amphibians - common_name: common frog - family: Ranidae - hub: others - order: Anura - scientific_name: Rana temporaria - status: 8-NCBI - taxon_id: '8407' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rana_temporaria/aRanTem1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rana_temporaria/aRanTem1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rana_temporaria/aRanTem1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rana_temporaria/aRanTem1/genomic_data/pacbio/ - trio: '' - vglId: aRanTem1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_015227805.1 - class: Aves,birds - common_name: Barn swallow - family: Hirundinidae - hub: vgl - order: Passeriformes - scientific_name: Hirundo rustica - status: 8-NCBI - taxon_id: '43150' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hirundo_rustica/bHirRus1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hirundo_rustica/bHirRus1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hirundo_rustica/bHirRus1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Hirundo_rustica/bHirRus1/genomic_data/pacbio/ - trio: '' - vglId: bHirRus1 - vgp_phase: phase2 -- asm: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lagopus_muta/bLagMut1/assembly_vgp_standard_2.0/ - class: Aves,birds - common_name: rock ptarmigan - family: Phasianidae - hub: others - order: Galliformes - scientific_name: Lagopus muta - status: 5-asm_done - taxon_id: '64668' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lagopus_muta/bLagMut1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lagopus_muta/bLagMut1/genomic_data/pacbio/ - trio: '' - vglId: bLagMut1 - vgp_phase: phase3 -- asm: '#' - class: Reptilia,reptiles - common_name: Florida worm lizard - family: Rhineuridae - hub: vgl - order: Squamata - scientific_name: Rhineura floridana - status: 3-data_progress - taxon_id: '261503' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Rhineura_floridana/rRhiFlo1/genomic_data/bionano/ - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - trio: '' - vglId: rRhiFlo1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_009769525.1 - class: Aves,birds - common_name: yellow-throated sandgrouse - family: Pteroclidae - hub: vgl - order: Pterocliformes - scientific_name: Pterocles gutturalis - status: 8-NCBI - taxon_id: '240206' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pterocles_gutturalis/bPteGut1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pterocles_gutturalis/bPteGut1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pterocles_gutturalis/bPteGut1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Pterocles_gutturalis/bPteGut1/genomic_data/pacbio/ - trio: '' - vglId: bPteGut1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_003369685.2 - class: Mammalia,mammals - common_name: cattle - family: Bovidae - hub: others - order: Artiodactyla - scientific_name: Bos taurus - status: 7-NCBI - taxon_id: '9913' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - trio: '' - vglId: mBosTau1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_900496995.4 - class: Aves,birds - common_name: golden eagle - family: Accipitridae - hub: others - order: Falconiformes - scientific_name: Aquila chrysaetos - status: 8-NCBI - taxon_id: '8962' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aquila_chrysaetos/bAquChr1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aquila_chrysaetos/bAquChr1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aquila_chrysaetos/bAquChr1/genomic_data/dovetail/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Aquila_chrysaetos/bAquChr1/genomic_data/pacbio/ - trio: '' - vglId: bAquChr1 - vgp_phase: phase1 -- asm: '#' - class: Chondrichthyes,cartilaginous fishes - common_name: Atlantic stingray - family: Dasyatidae - hub: vgl - order: Myliobatiformes - scientific_name: Hypanus sabinus - status: 1-DNA_isolation - taxon_id: '79690' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: sHypSab1 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_900880675.2 - class: Actinopterygii,Bony fishes - common_name: gilthead seabream - family: Sparidae - hub: others - order: Spariformes - scientific_name: Sparus aurata - status: 8-NCBI - taxon_id: '8175' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sparus_aurata/fSpaAur1/genomic_data/10x/ - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sparus_aurata/fSpaAur1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Sparus_aurata/fSpaAur1/genomic_data/pacbio/ - trio: '' - vglId: fSpaAur1 - vgp_phase: phase1 -- asm: '#' - class: Aves,birds - common_name: American robin - family: Turdidae - hub: vgl - order: Passeriformes - scientific_name: Turdus migratorius - status: 0-data_queued - taxon_id: '9188' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bTurMig1 - vgp_phase: phase4 -- asm: '#' - class: Aves,birds - common_name: great cormorant - family: Phalacrocoracidae - hub: vgl - order: Pelecaniformes - scientific_name: Phalacrocorax carbo - status: 2-data_progress - taxon_id: '9209' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 0 - url: '#' - vglId: bPhaCar1 - vgp_phase: phase1 -- asm: '#' - class: Actinopterygii,Bony fishes - common_name: John dory - family: Zeidae - hub: others - order: Zeiformes - scientific_name: Zeus faber - status: 3-data_progress - taxon_id: '64108' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Zeus_faber/fZeuFab1/genomic_data/10x/ - BN: - status: 0 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 0 - url: '#' - ONT: - status: 0 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Zeus_faber/fZeuFab1/genomic_data/pacbio/ - trio: '' - vglId: fZeuFab1 - vgp_phase: phase1 -- asm: '#' - class: Reptilia,reptiles - common_name: Aeolian wall lizard - family: Lacertidae - hub: vgl - order: Squamata - scientific_name: Podarcis raffonei - status: 3-data_progress - taxon_id: '65483' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Podarcis_raffonei/rPodRaf1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Podarcis_raffonei/rPodRaf1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Podarcis_raffonei/rPodRaf1/genomic_data/pacbio/ - trio: '' - vglId: rPodRaf1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_007474595.2 - class: Mammalia,mammals - common_name: Canada lynx - family: Felidae - hub: vgl - order: Carnivora - scientific_name: Lynx canadensis - status: 8-NCBI - taxon_id: '61383' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lynx_canadensis/mLynCan4/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lynx_canadensis/mLynCan4/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lynx_canadensis/mLynCan4/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Lynx_canadensis/mLynCan4/genomic_data/pacbio/ - trio: '' - vglId: mLynCan4 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_010993605.1 - class: Hyperoartia,jawless,Agnatha - common_name: sea lamprey - family: Petromyzontidae - hub: vgl - order: Petromyzontiformes - scientific_name: Petromyzon marinus - status: 8-NCBI - taxon_id: '7757' - techs: - 10X: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Petromyzon_marinus/kPetMar1/genomic_data/10x/ - BN: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Petromyzon_marinus/kPetMar1/genomic_data/bionano/ - HiC: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Petromyzon_marinus/kPetMar1/genomic_data/arima/ - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: https://genomeark.s3.amazonaws.com/index.html?prefix=species/Petromyzon_marinus/kPetMar1/genomic_data/pacbio/ - trio: '' - vglId: kPetMar1 - vgp_phase: phase1 -- asm: '#' - class: Amphibia,amphibians - common_name: corroboree frog - family: Myobatrachidae - hub: vgl - order: Anura - scientific_name: Pseudophryne corroboree - status: 2-data_progress - taxon_id: '495146' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 0 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 2 - url: '#' - vglId: aPseCor3 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_914725855.1 - class: Actinopterygii,Bony fishes - common_name: yellowfin tuna - family: Scombridae - hub: others - order: Scombriformes - scientific_name: Thunnus albacares - status: 7-NCBI - taxon_id: '8236' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: fThuAlb1 - vgp_phase: phase4 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_016128335.1 - class: Aves,birds - common_name: emu - family: Dromaiidae - hub: others - order: Casuariiformes - scientific_name: Dromaius novaehollandiae - status: 7-NCBI - taxon_id: '8790' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: bDroNov1 - vgp_phase: phase1 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_015476345.1 - class: Aves,birds - common_name: mallard - family: Anatidae - hub: others - order: Anseriformes - scientific_name: Anas platyrhynchos - status: 7-NCBI - taxon_id: '8839' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: bAnaPla1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_904848185.1 - class: Actinopterygii,Bony fishes - common_name: yellowfin seabream - family: Sparidae - hub: others - order: Spariformes - scientific_name: Acanthopagrus latus - status: 7-NCBI - taxon_id: '8177' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 4 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 1 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: fAcaLat1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_900634795.3 - class: Actinopterygii,Bony fishes - common_name: Siamese fighting fish - family: Osphronemidae - hub: others - order: Anabantiformes - scientific_name: Betta splendens - status: 7-NCBI - taxon_id: '158456' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 4 - url: '#' - HiC: - status: 4 - url: '#' - Ilm: - status: 1 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: fBetSpl5 - vgp_phase: phase2 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_903995435.1 - class: Mammalia,mammals - common_name: golden spiny mouse - family: Muridae - hub: others - order: Rodentia - scientific_name: Acomys russatus - status: 7-NCBI - taxon_id: '60746' - techs: - 10X: - status: 4 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 4 - url: '#' - Ilm: - status: 1 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: mAcoRus1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCF_903995425.1 - class: Mammalia,mammals - common_name: southern grasshopper mouse - family: Cricetidae - hub: others - order: Rodentia - scientific_name: Onychomys torridus - status: 7-NCBI - taxon_id: '38674' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 4 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: mOncTor1 - vgp_phase: phase3 -- asm: https://www.ncbi.nlm.nih.gov/assembly/GCA_903684855.2 - class: Actinopterygii,Bony fishes - common_name: zebrafish - family: Danionidae - hub: others - order: Cypriniformes - scientific_name: Danio rerio - status: 7-NCBI - taxon_id: '7955' - techs: - 10X: - status: 1 - url: '#' - BN: - status: 1 - url: '#' - HiC: - status: 1 - url: '#' - Ilm: - status: 4 - url: '#' - ONT: - status: 4 - url: '#' - PB: - status: 1 - url: '#' - vglId: fDreTuH1 - vgp_phase: other