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environment.yml
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environment.yml
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name: tma
channels:
- pytorch
- conda-forge
- anaconda
- defaults
dependencies:
- appnope=0.1.0=py37_0
- attrs=20.3.0=pyhd3eb1b0_0
- backcall=0.2.0=py_0
- blas=1.0=mkl
- bzip2=1.0.8=hc929b4f_4
- c-ares=1.18.1=h0d85af4_0
- ca-certificates=2021.10.8=h033912b_0
- cairo=1.16.0=h0ab9d94_1001
- certifi=2021.10.8=py37hf985489_1
- cloudpickle=1.6.0=py_0
- cycler=0.10.0=py_2
- cytoolz=0.11.0=py37haf1e3a3_0
- dask-core=2.30.0=py_0
- decorator=4.4.2=py_0
- et_xmlfile=1.0.1=py_1001
- ffmpeg=4.0=h01ea3c9_0
- fontconfig=2.13.1=h1027ab8_1000
- freetype=2.10.4=h3f75d11_0
- gdk-pixbuf=2.42.2=h976c81d_2
- gettext=0.19.8.1=h7937167_1005
- glib=2.66.4=h22858aa_1
- graphite2=1.3.13=h12caacf_1001
- h5py=2.8.0=py37h878fce3_3
- harfbuzz=1.8.8=hb8d4a28_0
- hdf5=1.10.2=hc401514_3
- icu=58.2=h0a44026_1000
- imageio=2.9.0=py_0
- importlib-metadata=2.0.0=py_1
- importlib_metadata=2.0.0=1
- intel-openmp=2019.4=233
- ipykernel=5.3.4=py37h5ca1d4c_0
- ipython=7.18.1=py37h5ca1d4c_0
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- jasper=2.0.14=h45d9283_1
- jdcal=1.4.1=py_0
- jedi=0.17.2=py37_0
- joblib=0.17.0=py_0
- jpeg=9d=hbcb3906_0
- jsonschema=3.2.0=py_2
- jupyter_client=6.1.7=py_0
- jupyter_core=4.6.3=py37_0
- kiwisolver=1.3.1=py37h8ec247f_0
- krb5=1.19.2=hcd88c3b_0
- lcms2=2.11=h11f7e16_1
- libcurl=7.78.0=hb8e4fae_0
- libcxx=11.0.0=h4c3b8ed_1
- libedit=3.1.20210910=hca72f7f_0
- libev=4.33=haf1e3a3_1
- libffi=3.3=hb1e8313_2
- libgfortran=3.0.1=h93005f0_2
- libglib=2.66.4=h7424822_1
- libiconv=1.16=haf1e3a3_0
- libnghttp2=1.41.0=h7580e61_2
- libopencv=3.4.2=h7c891bd_1
- libopus=1.3.1=hc929b4f_1
- libpng=1.6.37=h7cec526_2
- libsodium=1.0.18=h1de35cc_0
- libssh2=1.10.0=h52ee1ee_2
- libtiff=4.2.0=h355d032_0
- libuv=1.40.0=haf1e3a3_0
- libvpx=1.7.0=h378b8a2_0
- libwebp-base=1.1.0=hbcb3906_3
- libxml2=2.9.10=h7cdb67c_3
- llvm-openmp=10.0.0=h28b9765_0
- lz4-c=1.9.2=hb1e8313_3
- mkl=2019.4=233
- mkl-service=2.3.0=py37hfbe908c_0
- mkl_fft=1.2.0=py37hc64f4ea_0
- mkl_random=1.1.1=py37h959d312_0
- nbformat=5.1.2=pyhd3eb1b0_1
- ncurses=6.3=hca72f7f_2
- networkx=2.5=py_0
- ninja=1.10.2=hf7b0b51_1
- olefile=0.46=pyh9f0ad1d_1
- opencv=3.4.2=py37h6fd60c2_1
- openjpeg=2.4.0=h6cbf5cd_0
- openpyxl=3.0.6=pyhd3eb1b0_0
- openslide=3.4.1=h17b48f0_1
- openssl=1.1.1l=h0d85af4_0
- pandas=1.1.3=py37hb1e8313_0
- parso=0.7.0=py_0
- pcre=8.44=h4a8c4bd_0
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=8.0.1=py37h09f51b7_0
- pip=20.2.4=py37_0
- pixman=0.38.0=h01d97ff_1003
- plotly=4.14.3=pyhd3eb1b0_0
- poppler=0.89.0=hd735947_5
- poppler-data=0.4.11=hd8ed1ab_0
- prompt-toolkit=3.0.8=py_0
- psutil=5.8.0=py37h9ed2024_1
- ptyprocess=0.6.0=pyhd3eb1b0_2
- py-opencv=3.4.2=py37h7c891bd_1
- pydicom=2.2.2=pyh6c4a22f_0
- pygments=2.7.3=pyhd3eb1b0_0
- pyparsing=2.4.7=pyh9f0ad1d_0
- pyrsistent=0.17.3=py37haf1e3a3_0
- python=3.7.1=haf84260_7
- python-dateutil=2.8.1=py_0
- python_abi=3.7=1_cp37m
- pytorch=1.8.1=py3.7_0
- pytz=2020.1=py_0
- pywavelets=1.1.1=py37haf1e3a3_2
- pyyaml=5.3.1=py37haf1e3a3_1
- pyzmq=19.0.2=py37hb1e8313_1
- readline=7.0=h1de35cc_5
- retrying=1.3.3=py37_2
- seaborn=0.11.0=py_0
- setuptools=50.3.0=py37h0dc7051_1
- six=1.15.0=py_0
- sqlite=3.33.0=hffcf06c_0
- threadpoolctl=2.1.0=pyh5ca1d4c_0
- tifffile=2020.10.1=py37h0cf3a3e_2
- tk=8.6.10=hb0a8c7a_0
- toolz=0.11.1=py_0
- tornado=6.0.4=py37h1de35cc_1
- tqdm=4.55.0=pyhd8ed1ab_0
- traitlets=5.0.5=py_0
- typing_extensions=3.7.4.3=pyha847dfd_0
- wcwidth=0.2.5=py_0
- wheel=0.36.2=pyhd3eb1b0_0
- xz=5.2.5=h1de35cc_0
- yaml=0.2.5=haf1e3a3_0
- zeromq=4.3.3=hb1e8313_3
- zipp=3.4.0=pyhd3eb1b0_0
- zlib=1.2.11=h1de35cc_3
- zstd=1.4.5=h289c70a_2
- pip:
- chardet==4.0.0
- dill==0.3.3
- idna==2.10
- importlib-resources==5.2.2
- iniconfig==1.1.1
- kaleido==0.1.0
- matplotlib==3.3.4
- minecart==0.3.0
- missingpy==0.2.0
- neurocombat==0.2.12
- numpy==1.20.1
- openslide-python==1.1.2
- packaging==21.0
- patsy==0.5.2
- pdf2image==1.16.0
- pdfminer3k==1.3.4
- pluggy==0.13.1
- ply==3.11
- py==1.10.0
- pymupdf==1.19.2
- pypdf2==1.26.0
- pyriemann==0.2.7
- pytesseract==0.3.8
- pytest==6.2.4
- requests==2.25.1
- scikit-image==0.18.1
- scikit-learn==0.24.1
- scipy==1.6.1
- statsmodels==0.13.1
- toml==0.10.2
- torch==1.8.0
- urllib3==1.26.3