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can magnet be used with other taxonomy classifiers? #6

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humbleflowers opened this issue Aug 21, 2024 · 1 comment
Open

can magnet be used with other taxonomy classifiers? #6

humbleflowers opened this issue Aug 21, 2024 · 1 comment
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@humbleflowers
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magnet.py takes taxonomy identifier and abundances percentage as input. I was wondering if i can make a tsv with these columns from output of other tool and run this ? Are there are caveats or whether it was tested?

@beleafs
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beleafs commented Aug 23, 2024

Yes. You can use any taxonomy classifier as long as they include taxid in the output.

@beleafs beleafs added the question Further information is requested label Aug 23, 2024
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