From e3d43fe4107f5b2edaa69ecf08115fc29ba97b98 Mon Sep 17 00:00:00 2001
From: Ariel Rokem <arokem@gmail.com>
Date: Thu, 7 Nov 2024 12:16:39 -0800
Subject: [PATCH] We'll download data as script.

---
 binder/postBuild         |  1 -
 content/download_data.py | 17 +++++++++++++++++
 2 files changed, 17 insertions(+), 1 deletion(-)
 delete mode 100644 binder/postBuild
 create mode 100644 content/download_data.py

diff --git a/binder/postBuild b/binder/postBuild
deleted file mode 100644
index de88748..0000000
--- a/binder/postBuild
+++ /dev/null
@@ -1 +0,0 @@
-python -c"import AFQ.data.fetch as afd; afd.organize_stanford_data(clear_previous_afq='track')"
diff --git a/content/download_data.py b/content/download_data.py
new file mode 100644
index 0000000..d01691b
--- /dev/null
+++ b/content/download_data.py
@@ -0,0 +1,17 @@
+
+# Set environment to point to local data directory for
+
+import os
+import os.path as op
+pwd = os.getcwd()
+os.environ["DIPY_HOME"] = op.join(pwd, "..", "data", "tractometry")
+os.environ["AFQ_HOME"] = op.join(pwd, "..", "data", "tractometry")
+
+# Stanford HARDI
+import AFQ.data.fetch as afd
+afd.organize_stanford_data()
+
+# Templates:
+afd.fetch_templates()
+afd.fetch_pediatric_templates()
+