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biobank
Here are 32 public repositories matching this topic...
MOLGENIS - for scientific data: management, exploration, integration and analysis.
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Dec 22, 2023 - Java
An R package to manipulate and explore UK Biobank data
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Feb 22, 2023 - HTML
ukbREST: efficient and streamlined data access for reproducible research of large biobanks
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Jul 12, 2021 - Python
LImBuS is an open source, standards compliant Biobank Information Management System developed by researchers from Aberystwyth University.
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Aug 14, 2024 - Python
The Minimum Information About BIobank data Sharing (MIABIS) is a biobank-specific terminology enabling the sharing of minimal biobank-related data for different purposes across a wide range of database implementations.
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Nov 5, 2024
An Open-source access negotation system for Research Infrastructures
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Dec 12, 2024 - Java
Biorepository application for tracking biospecimens.
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Jun 9, 2024 - Java
snpnet - Efficient Lasso Solver for Large-scale genetic variant data
genetics linear-regression statistical-learning prediction lasso sparse survival-analysis cox-regression biobank ukbiobank elastic-net-regression snpnet-cox
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Mar 5, 2024 - R
The BBMRI-ERIC Negotiator is a service for structured negotiation with biological resources dealing with human data and/or biological samples. The reference implementation for the frontend is available in this repository.
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Dec 13, 2024 - Vue
Inofficial R client for the DSMZ's Bacterial Diversity Metadatabase (former contact: @katrinleinweber). https://api.bacdive.dsmz.de/client_examples seems to be the official alternatives.
diversity r api-client rstats microbiology bacteria r-package biobank rlang bacterial-database microorganism webservice-client bacterial bacteriology rlanguage bacterial-samples bacdive
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May 28, 2022 - R
The BBMRI-ERIC Negotiator service for structured negotiation with biological resources dealing with human data and/or biological samples.
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Feb 20, 2024 - Java
This is the source for the BBMRI.de / GBA Implementation Guide.
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Sep 1, 2023 - GLSL
Multiresponse time-to-event Cox proportional hazards model - CPU
cpu survival-analysis cox-regression cox-model biobank human-genetics survival-prediction multiresponse-sparse-regression cox-ph
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Feb 9, 2021 - R
Command line tool written in c++ for easily extracting light and temperature data from Axivity AX3 accelerometers used in the UKBiobank
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Feb 13, 2019 - C++
Multiresponse time-to-event Cox proportional hazards model - GPU
genetics gpu gpu-acceleration survival-analysis gpu-computing cox-regression prediction-model biobank multiresponse-sparse-regression
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Jan 2, 2021 - C++
exploration of TreeWas/TreeWas2 code for the Zaitlen lab. Based on TreeWas developed by McVean Lab @ Oxford.
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Oct 5, 2018 - HTML
A script that will download meta-data from the UK Biobank website (https://www.ukbiobank.ac.uk).
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Jan 28, 2022 - Python
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