docs.yml

name: Docs
on: [push, release]

jobs:
  notebooks:
    name: "Build the notebooks for the docs"
    runs-on: macos-latest
    steps:
      - name: Checkout
        uses: actions/checkout@v4
        with:
          persist-credentials: false # otherwise, the token used is the GITHUB_TOKEN, instead of your personal token
          fetch-depth: 0 # otherwise, you will failed to push refs to dest repo

      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: 3.9
      #- name: Checkout
      #  uses: actions/checkout@v4
      - name: Init Environment
        #shell: bash -l {0}
        run: |
          
          brew update
          brew install --cask basictex

          eval "$(/usr/libexec/path_helper)"

      - name: Setup base pkgs
        #shell: bash -l {0}
        run: |
          brew install hdf5

          python -m pip install --upgrade pip wheel

          python -m pip install numpy numba tempita jupytext jupyterthemes jupyter_latex_envs papermill matplotlib astropy pandas tables healpy
          python -m pip install ebltable black cython pkgconfig h5py

          
      - name: Install the package
        #shell: bash -l {0}
        run: |

          #python setup.py develop
          pip3 install -e .
          
      - name: Execute the notebooks
        #shell: bash -l {0}
        run: |
          # Make sure we fail in case of error
          set -e
          # Download an example file
          
          wget https://www.astropy.org/astropy-data/photometry/spitzer_example_image.fits

          mv spitzer_example_image.fits docs/md/
          
          jupytext --to ipynb --execute docs/md/*.md
          mv docs/md/*.ipynb docs/notebooks/
          ls docs/notebooks
        env:
          OMP_NUM_THREADS: 1
          MKL_NUM_THREADS: 1
          NUMEXPR_NUM_THREADS: 1
          MPLBACKEND: "Agg"
      - name: Create function gallery
        #shell: bash -l {0}
        run: |
          # move to the scripts directory
          cd scripts


          # now generate the function docs
          python generate_func_docs.py

          cd ..

          ls docs/notebooks
          
      - uses: actions/upload-artifact@v4
        with:
          name: notebooks-for-${{ github.sha }}
          path: docs/notebooks


      - name: Sleep for 10 min
        uses: juliangruber/sleep-action@v1
        with:
          time: 10m

      - name: Trigger RTDs build
        uses: dfm/rtds-action@main
        with:
          webhook_url: ${{ secrets.RTDS_WEBHOOK_URL }}
          webhook_token: ${{ secrets.RTDS_WEBHOOK_TOKEN }}
          commit_ref: ${{ github.ref }}

  api_doc:
    name: "Create the API stubs"
    runs-on: macos-latest
    steps:
      - uses: actions/checkout@v4
        with:
          persist-credentials: false # otherwise, the token used is the GITHUB_TOKEN, instead of your personal token
          fetch-depth: 0 # otherwise, you will failed to push refs to dest repo

      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: 3.9

      - name: Build the API doc
        run: |

          brew install c-blosc
          brew install hdf5

          pip3 install tempita tables
          pip3 install cython blosc2 h5py
          pip3 install numpy scipy numba astropy pandas
          pip3 install wheel pkgconfig

          #python setup.py develop
          pip3 install -e .

          brew install sphinx-doc pandoc

          pip3 install mock recommonmark
          pip3 install sphinx-rtd-dark-mode
          pip3 install -U sphinx


          sphinx-apidoc -f -o docs/api/ astromodels


      - uses: actions/upload-artifact@v4
        with:
          name: api-stubs-for-${{ github.sha }}
          path: docs/api


  build_docs:
    name: "Build the Documentation"
    runs-on: macos-latest
    needs: [notebooks, api_doc]
    steps:


      - uses: actions/checkout@v4
        with:
          persist-credentials: false # otherwise, the token used is the GITHUB_TOKEN, instead of your personal token
          fetch-depth: 0 # otherwise, you will failed to push refs to dest repo

      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: 3.9

      - name: Install package
        run: |

          brew install c-blosc
          brew install hdf5

          pip3 install tempita
          pip3 install cython blosc2 h5py
          pip3 install numpy scipy numba astropy

          brew install sphinx-doc pandoc

          pip3 install wheel pkgconfig
          pip3 install mock recommonmark
          pip3 install sphinx-rtd-dark-mode sphinx-math-dollar
          pip3 install -r docs/requirements.txt

          #python setup.py develop
          pip3 install -e .

          rm -rf docs/md/*



      - uses: actions/download-artifact@master
        with:
          name: notebooks-for-${{ github.sha }}
          path: docs/notebooks


      - uses: actions/download-artifact@master
        with:
          name: api-stubs-for-${{ github.sha }}
          path: docs/notebooks/api

      - name: Build and Commit
        uses: sphinx-notes/pages@v2
        with:
          documentation_path: docs
          sphinx_version: 5.1.1
          requirements_path: docs/requirements.txt


      - name: Push changes
        if: github.event_name == 'push' #&& startsWith(github.event.ref, 'refs/tags')
        uses: ad-m/github-push-action@master
        with:
          github_token: ${{ secrets.GITHUB_TOKEN }}
          branch: gh-pages