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[CLOSED] build network from fold changes #139

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diffany-admin opened this issue Dec 22, 2014 · 1 comment
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[CLOSED] build network from fold changes #139

diffany-admin opened this issue Dec 22, 2014 · 1 comment
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prior:high resolved:fixed type:feature
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V2.0

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Issue by svlandeg
Fri May 9 13:59:04 2014

Once the R script is run and we have differentially expressed genes (#123), build networks from this data. Either start from the data generated in Diffany, or start from the published data from #128
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Comment by svlandeg
Fri May 16 15:50:38 2014

Currently done (NetworkConstruction): define overexpressed genes as the node set (getSignificantGenes) and retrieve PPIs between them (readPPIsByLocustags) + define virtual regulations (constructVirtualRegulations)

@diffany-admin diffany-admin added this to the V2.0 milestone Dec 22, 2014
This was referenced Dec 22, 2014
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@diffany-admin diffany-admin mentioned this issue Dec 22, 2014
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