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We want to have a moscot.neural module which implements the discrete problems as equivalent neural problems. Therefore, we consecutively do the following steps:
moscot.neural.base should have NeuralOTProblem (currently CondOTProblem, instead of OTProblem in discrete case), and the NeuralOutput (instead of the OTTOutput in discrete case), this can be adapted from the current implementation. Therefore, restructure the output into a BaseOutput which is the parent class of DiscreteOTOutput and NeuralOTOutput
moscot.neural.solvers in future times should include GenotLin, GenotQuad, and OTCFM, start with GenotLin, because it's implemented already, and extend it to GenotQuad. OTCFM will be added later.
Port the dataloader (or roughly the idea of the dataloader) from CellFlow, and extend it to include quadratic terms.
Let's also distinguish between the data representation which we compute the coupling in, and the one which are input/output to the flow
The text was updated successfully, but these errors were encountered:
We want to have a moscot.neural module which implements the discrete problems as equivalent neural problems. Therefore, we consecutively do the following steps:
NeuralOTProblem
(currentlyCondOTProblem
, instead ofOTProblem
in discrete case), and theNeuralOutput
(instead of theOTTOutput
in discrete case), this can be adapted from the current implementation. Therefore, restructure the output into aBaseOutput
which is the parent class ofDiscreteOTOutput
andNeuralOTOutput
GenotLin
,GenotQuad
, andOTCFM
, start withGenotLin
, because it's implemented already, and extend it toGenotQuad
.OTCFM
will be added later.The text was updated successfully, but these errors were encountered: