diff --git a/docs/about/cite.rst b/docs/about/cite.rst index 54f76d8c..01af543c 100644 --- a/docs/about/cite.rst +++ b/docs/about/cite.rst @@ -18,7 +18,7 @@ CellRank's :class:`~cellrank.kernels.VelocityKernel` with classical RNA velocity } If you are using the :class:`~cellrank.kernels.PseudotimeKernel`, :class:`~cellrank.kernels.CytoTRACEKernel`, :class:`~cellrank.kernels.RealTimeKernel`, or the :class:`~cellrank.kernels.VelocityKernel` with velocities inferred -from metabolic labeling data using the CellRank 2 approach, cite :cite:`weiler:23` as: +from metabolic labeling data using the CellRank 2 approach, cite :cite:`weiler:24` as: .. code-block:: bibtex diff --git a/docs/index.rst b/docs/index.rst index 732dcf8b..193ce17f 100644 --- a/docs/index.rst +++ b/docs/index.rst @@ -12,7 +12,7 @@ CellRank 2: Unified fate mapping in multiview single-cell data :align: center :class: only-dark -**CellRank** :cite:`lange:22,weiler:23` is a modular framework to study cellular dynamics based on Markov state modeling of +**CellRank** :cite:`lange:22,weiler:24` is a modular framework to study cellular dynamics based on Markov state modeling of multi-view single-cell data. See :doc:`about CellRank ` to learn more and :doc:`our citation guide ` for guidance on citing our work correctly. Also, read our `recent preprint `_ to see the new CellRank 2 features in action. diff --git a/docs/references.bib b/docs/references.bib index c0eecaa5..2754e6a9 100644 --- a/docs/references.bib +++ b/docs/references.bib @@ -803,12 +803,17 @@ @article{bastidas:17 year = {2017}, } -@article{weiler:23, - title = {Unified fate mapping in multiview single-cell data}, - author = {Weiler, Philipp and Lange, Marius and Klein, Michal and Pe{\textquotesingle}er, Dana and Theis, Fabian}, - doi = {10.1101/2023.07.19.549685}, - journal = {bioRxiv}, - url = {https://doi.org/10.1101/2023.07.19.549685}, - year = {2023}, - publisher = {Cold Spring Harbor Laboratory}, +@article{weiler:24, + title = {CellRank 2: unified fate mapping in multiview single-cell data}, + volume = {21}, + ISSN = {1548-7105}, + url = {http://dx.doi.org/10.1038/s41592-024-02303-9}, + DOI = {10.1038/s41592-024-02303-9}, + number = {7}, + journal = {Nature Methods}, + publisher = {Springer Science and Business Media LLC}, + author = {Weiler, Philipp and Lange, Marius and Klein, Michal and Pe'er, Dana and Theis, Fabian}, + year = {2024}, + month = jun, + pages = {1196--1205} }