#report#-appendix.tex

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\section{POPULATION PHARMACOKINETIC ANALYSIS PLAN}
\label{sec:DAP}
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\section{LISTINGS OF NONMEM CONTROL STREAMS AND REPORT FILES}
\label{sec:NMN}

\subsection{Fit \texorpdfstring{{\fontfamily{cmr}\selectfont\textnumero}}{no.} 1117171}
\label{sec:nm.basemodel}
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\lstinputlisting[]{../analysis/tables/run504_no_cov1117171.rep}

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\subsection{Fit \texorpdfstring{{\fontfamily{cmr}\selectfont\textnumero}}{no.} 1117172}
\label{sec:nm.fullcovmodel}
\lstinputlisting[]{../analysis/tables/run504_full_cov1117172.rep}

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\subsection{Fit \texorpdfstring{{\fontfamily{cmr}\selectfont\textnumero}}{no.} 1117173}
\label{sec:nm.finalmodel}
\lstinputlisting[]{../analysis/tables/run504_with_cov_fix1117173.rep}

\clearpage

\section{LISTINGS OF SOURCE FILES}
\label{sec:SPL}

\subsection{R Scripts}
\label{sec:Rscripts}


\subsubsection{Exploratory analysis}
\label{sec:exploratory.R}
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  \lstinputlisting[]{../analysis/exploratory.R}
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\subsubsection{Post-processing of NONMEM runs}
\label{sec:postprocessing.R}
  \lstinputlisting[]{../analysis/postprocessing.R}
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\subsubsection{Goodness-of-fit plots and parameter summary}
\label{sec:standardplots.R}
  \lstinputlisting[]{../analysis/standard.plots.R}
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\subsection{R Settings}
\label{sec:Rsettings}

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\lstinputlisting{../analysis/tables/RsessionInfo.txt}


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