pyproject.toml

[build-system]
requires = [
    "setuptools>=61.0",
    "wheel>=0.37"
]
build-backend = "setuptools.build_meta"

[project]
name = "pathcensus"
requires-python = ">=3.8"
version = "0.1"
authors = [{ name = "Szymon Talaga", email = "stalaga@protonmail.com" }]
description = """\
    Structural similarity and complementarity coefficients \
    for undirected networks based on efficient counting
    of 2- and 3-paths and 3- and 4-cycles\
    """
readme = "README.rst"
license = { file = "LICENSE" }
keywords = [
    "networks", "graphs", "undirected", "weighted",
    "bipartite", "network science", "network geometry",
    "triples", "quadruples", "triangles", "quadrangles",
    "path census", "motifs", "relational principles", "homophily",
    "similarity", "complementarity", "structural equivalence",
    "random geometric graph", "latent space model",
    "exponential random graph", "ergm"
]
classifiers = [
    "Programming Language :: Python :: 3",
    "Natural Language :: English",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent"
]
dependencies = [
    "numpy>=1.20",
    "numba>=0.50",
    "scipy>=1.7",
    "pandas>=1.3",
    "statsmodels>=0.12",
    "NEMtropy>=2.0",
    "tqdm>=4.62"
]

[project.optional-dependencies]
test = [
    "ipython>=7.26",
    "pylint>=2.9",
    "pytest>=6.2",
    "pytest-runner>=5.3",
    "pytest-pylint>=0.18",
    "pytest-cov>=3.0.0",
    "python-igraph>=0.9",
    "networkx>=2.6"
]
docs = [
    "Sphinx>=4.3",
    "sphinx-rtd-theme>=1.0",
    "sphinxcontrib-bibtex>=2.4"
]

[project.urls]
documentation = "https://pathcensus.readthedocs.io/en/latest/"
repository = "https://github.com/sztal/pathcensus"
changelog = "https://github.com/sztal/pathcensus/blob/master/HISTORY.rst"

[tool.setuptools]
package-dir = { pathcensus = "pathcensus" }

# PyTest configuration
[tool.pytest.ini_options]
testpaths = [
    "tests",
    "pathcensus"
]
addopts = [
    "-s",
    "--pdbcls=IPython.terminal.debugger:Pdb",
    "--doctest-glob=*.py",
    "--doctest-modules"
]
doctest_optionflags = [ "NORMALIZE_WHITESPACE" ]
python_files = [ "test_*.py" ]
python_classes = [ "Test*" ]
python_functions = [ "test_*" ]

# Coverage configuration
[tool.coverage]
run.omit = ["*/core/*.py"]