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Add tests to check LS HMM of _tskit.lshmm compared to BEAGLE
Release #303: Commit 964b8e0 pushed by szhan
September 13, 2023 14:28 49s test_imputation
September 13, 2023 14:28 49s
Use np.testing
Release #302: Commit 0486b0f pushed by szhan
September 13, 2023 14:27 1m 0s test_imputation
September 13, 2023 14:27 1m 0s
Fix bug
Release #301: Commit 2f0f3ce pushed by szhan
September 13, 2023 14:23 35s test_imputation
September 13, 2023 14:23 35s
Refactor and njit
Release #300: Commit 3830c64 pushed by szhan
September 13, 2023 14:14 51s test_imputation
September 13, 2023 14:14 51s
Revert
Release #299: Commit 2799ad3 pushed by szhan
September 13, 2023 13:48 57s test_imputation
September 13, 2023 13:48 57s
Remove unnecessary njit calls
Release #298: Commit 641a121 pushed by szhan
September 13, 2023 13:45 35s test_imputation
September 13, 2023 13:45 35s
Remove asserts
Release #297: Commit 01afc5e pushed by szhan
September 13, 2023 13:37 38s test_imputation
September 13, 2023 13:37 38s
Pass parameters
Release #296: Commit eb7e20a pushed by szhan
September 13, 2023 13:20 1m 1s test_imputation
September 13, 2023 13:20 1m 1s
Add tests to check LS HMM of _tskit.lshmm compared to BEAGLE
Release #295: Commit 49b9f51 pushed by szhan
September 13, 2023 13:13 34s test_imputation
September 13, 2023 13:13 34s
Refactor tests
Release #294: Commit 9822fd9 pushed by szhan
September 13, 2023 13:13 39s test_imputation
September 13, 2023 13:13 39s
Refactor
Release #293: Commit 9af8cfd pushed by szhan
September 13, 2023 12:56 47s test_imputation
September 13, 2023 12:56 47s
Assume all biallelic sites
Release #292: Commit 670e2ba pushed by szhan
September 13, 2023 12:44 34s test_imputation
September 13, 2023 12:44 34s
Update docstring
Release #291: Commit 6020892 pushed by szhan
September 13, 2023 12:35 50s test_imputation
September 13, 2023 12:35 50s
Minor refactor
Release #290: Commit efbe1fe pushed by szhan
September 13, 2023 12:28 1m 19s test_imputation
September 13, 2023 12:28 1m 19s
Fix
Release #289: Commit e38675d pushed by szhan
September 13, 2023 12:24 49s test_imputation
September 13, 2023 12:24 49s
Add tests to check LS HMM of _tskit.lshmm compared to BEAGLE
Release #288: Commit 58935f2 pushed by szhan
September 13, 2023 12:07 33s test_imputation
September 13, 2023 12:07 33s
Refactor interpolate_allele_probabilities
Release #287: Commit a4a1a04 pushed by szhan
September 13, 2023 12:06 37s test_imputation
September 13, 2023 12:06 37s
Return marker_interval_start
Release #286: Commit 92b58c8 pushed by szhan
September 13, 2023 12:03 42s test_imputation
September 13, 2023 12:03 42s
Add tests to check LS HMM of _tskit.lshmm compared to BEAGLE
Release #285: Commit b00c9b4 pushed by szhan
September 13, 2023 11:45 36s test_imputation
September 13, 2023 11:45 36s
Refactor get_map_alleles
Release #284: Commit f70badb pushed by szhan
September 13, 2023 11:44 38s test_imputation
September 13, 2023 11:44 38s
Fix bug
Release #283: Commit a148af3 pushed by szhan
September 13, 2023 11:36 43s test_imputation
September 13, 2023 11:36 43s
Refactor without using np.where
Release #282: Commit 11c285a pushed by szhan
September 13, 2023 09:17 38s test_imputation
September 13, 2023 09:17 38s
Refactor
Release #281: Commit b6d3978 pushed by szhan
September 12, 2023 18:31 36s test_imputation
September 12, 2023 18:31 36s
Remove unused flag
Release #280: Commit acdbf35 pushed by szhan
September 12, 2023 18:26 38s test_imputation
September 12, 2023 18:26 38s
Add tests to check LS HMM of _tskit.lshmm compared to BEAGLE
Release #279: Commit 34b2056 pushed by szhan
September 12, 2023 18:21 58s test_imputation
September 12, 2023 18:21 58s
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