.gitignore

.env
**/.npmrc
*.swp
*.DS_Store
/node_modules*/
*/node_modules*/
*/*/node_modules*/
npm-debug.log
public/bin
dist/*
**/dist

.sse/*
!.sse/README.md

server/app.js
server/genome/*.js
server/dataset/*.js
server/test/*.bundle.js
server/test/cache/*
server/**/*serverTests.js
server/routes/*.js
server/src/app.js
server/src/health.js
server/src/hicstat.js
server/package*/*

shared/types/docs.json
shared/types/*.js
shared/types/**/*.js
!shared/types/checkers/index.js
shared/types/terms/*.js
shared/types/routes/checkers/*

**/public/bin/*
public/tmp/*
/container/deps/public/cards/
public/data/*
public/stage/*
public/prod/*
public/ppdev/*
public/sjcharts
public/.htaccess
public/dev.html
public/svcnv.html
public/ALCL.html
.htaccess
public/builds/*
public/static/*.docx
public/static/*.pdf
**/rev.txt
public/docs/*/*
public/docs/readme.json
public/docs/server-api.json

/utils/vcf2genesamplematrix/bin.js
/utils/vcf2genesamplematrix/output.html
/utils/vcf2genesamplematrix/bin.smat.js
/utils/findspliceevent/bin2.js
/utils/findspliceevent/bin.js
/utils/countbamallele.phased/bin*
/utils/*/*.bundle.js*

container/public/example*
container/public/cards/*
container/dataset/*
container/**/pkg.json
container/ci-run.sh

**/rust/target/*

/dnanexus/app/vcf2matrix/resources/usr/bin/*

test/copies/*
test/testers/*
client/test/internals*.js
client/test/wpCompileTime.js
client/test/*.bundle.js*
client/test/init-esm.js
client/test/bundle/*

cairo-*/*
canvas/*
pixman-*/*
**/serverconfig*.json
!/server/test/serverconfig.json
!/container/ci/serverconfig.json
!/container/dev/serverconfig.json
**/server.js*
**/server.ts*
!client/rx/server.js
setup/*gz*
setup/*
**/tmpbuild*/*
**/tmppack*/*
pp-server/*
archive/*
**/package/*
**/package */*

*-stash.js

*.bak
*.tar
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*.min.js

deploys/

.vscode/launch.json
.vscode/settings.json
.idea/

*.key
*.pem
*.csr
*.ext
*.crt
.ssl
ssl-proxy.json
.RData
log.txt
**/*.log
*-debug.*
build/sj/env.sh
rust/Dockerfile